Query= MSMg01no102_e05.b1 MSMg01no102_e05.b1 CHROMAT_FILE:
MSMg01no102_e05.b1 PHD_FILE: MSMg01no102_e05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:00:48 2005
(189 letters)
>mm_chr3_32408556_32409144
Length = 589
Score = 350 bits (181), Expect = e-101
Identities = 184/185 (99%)
Strand = Plus / Plus
Query: 1 ataattcaaaaacaatgttcacagttatttatgctcatctaatttaatcctttgcttatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ataattcaaaaacaatgttcacagttatttatgctcatctaatttaatcctttgcttatt 260
Query: 61 gacggtcaaggtacgaaaaggatttaaatgacagaatgcaatcctttgtgataacctcgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gacggtcaaggtacgaaaaggatttaaatgacagaatgcaatcctttgtgataacctcgg 320
Query: 121 ttcactccatcaggacttctttttaggatttatttatttttgtatttaggtggggggatg 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcactccatcaggtcttctttttaggatttatttatttttgtatttaggtggggggatg 380
Query: 181 gggag 185
|||||
Sbjct: 381 gggag 385
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 189
Length of database: 589
Length adjustment: 8
Effective length of query: 181
Effective length of database: 581
Effective search space: 105161
Effective search space used: 105161
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no102_e05.g1 MSMg01no102_e05.g1 CHROMAT_FILE:
MSMg01no102_e05.g1 PHD_FILE: MSMg01no102_e05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:00:48 2005
(270 letters)
>mm_chr3_32513056_32513725
Length = 670
Score = 493 bits (255), Expect = e-144
Identities = 267/271 (98%), Gaps = 1/271 (0%)
Strand = Plus / Minus
Query: 1 tttgatatcctttatgtgttaagccagatgttctcacagctgcttcctgtactaccaccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tttgatatcctttatgtgttaagccagatgttctcacagctgcttcctgtactaccaccc 325
Query: 61 ccttaccctgaagcttctgagtctggttctgtggctcccttacgttgttgtgtaaatatg 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ccttaccctgaagcttctgtgtctggttctgtggctcccttacgttgttgtgtaaatatg 265
Query: 121 gtggtgtatctactgaaaacacacttttctcaatgtggtgttctacctcagttactgtcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gtggtgtatctactgaaaacacacttttctcaatgtggtgttctacctcagttactgtcc 205
Query: 181 tatgtctttctgtctgtctttcttttttttctttctttttttc-ctcttctctctctctc 239
|||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 204 tatgtctttctgtctgtctttcatttttttctttctttttttttctcttctctctctctc 145
Query: 240 tctctctctctctctctctctctctctctct 270
|||||||||||||||||||||||||||||||
Sbjct: 144 tctctctctctctctctctctctctctctct 114
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 64
Number of extensions: 22
Number of successful extensions: 22
Number of sequences better than 10.0: 1
Number of HSP's gapped: 18
Number of HSP's successfully gapped: 1
Length of query: 270
Length of database: 670
Length adjustment: 9
Effective length of query: 261
Effective length of database: 661
Effective search space: 172521
Effective search space used: 172521
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
