Query= MSMg01no103_e17.b1 MSMg01no103_e17.b1 CHROMAT_FILE:
MSMg01no103_e17.b1 PHD_FILE: MSMg01no103_e17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:02:10 2005
(487 letters)
>mm_chr3_83671435_83672325
Length = 891
Score = 770 bits (398), Expect = 0.0
Identities = 449/470 (95%), Gaps = 8/470 (1%)
Strand = Plus / Minus
Query: 5 gaattcattctctcttaccaattcgggaaagccatgtgacatcttcacacacagaggatt 64
|||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 466 gaattcattctctcagagcaattcgggaatgccatgtgacatcttcacacacagaggatt 407
Query: 65 aggtcagaagaaaagaatcaggaggtaggcacggcttgagagtgagcagtcacagtgccc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 aggtcagaagaaaagaatcaggaggtaggcacggcttgagagtgagcagtcacagtgccc 347
Query: 125 ataggactcttctacagctgatatgtgtcgaatgacttaatgagccttcagctttagatg 184
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 346 ataggactcttctacagctggtacgtgtcgaatgacttaatgagccttcagctttagatg 287
Query: 185 gtgtggaaatgcctccacataaacattcca----ttttctgtagattacatgggacatgg 240
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 286 gtgtggaaatgcctccacataaacattccagtttttttctgtagattacatgggacatgg 227
Query: 241 aacactttaacatgggcgttgggttctgagcatagttaaggtaaatcaggctgagctatg 300
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 226 aacactttaacatgggcgttgggttctgagcatagttaaggtaaaccaggctgagctatg 167
Query: 301 gtgttcagcaggctaaggcattaatgtaccgtttacttgctattttcattgtgtgacagg 360
|||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 166 gtgttcagcaggctaaggcattaatgcagtgtttacttgctattttcattgtgtgacagg 107
Query: 361 tatgtcggggtatgacacggactggcctcaatccacgggagaatcagggtcccggtacag 420
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 tatgtcggggtatgccacggactggcctcaatccacgggagaatcagggtcccggtacag 47
Query: 421 gtgggcagggagttggcaaaaaaatgacaaacaaacttgaactcaaggga 470
||||||||| |||||||||||||||||||||| | ||||||||||||
Sbjct: 46 gtgggcaggaagttggcaaaaaaatgacaaac----tcgaactcaaggga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 487
Length of database: 891
Length adjustment: 10
Effective length of query: 477
Effective length of database: 881
Effective search space: 420237
Effective search space used: 420237
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no103_e17.g1 MSMg01no103_e17.g1 CHROMAT_FILE:
MSMg01no103_e17.g1 PHD_FILE: MSMg01no103_e17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:02:10 2005
(251 letters)
>mm_chr3_83514842_83515493
Length = 652
Score = 456 bits (236), Expect = e-133
Identities = 248/252 (98%), Gaps = 1/252 (0%)
Strand = Plus / Plus
Query: 1 aattccagatctgagtgctgtttattgctttaacccacacatgttatttctggagatggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aattccagatctgagtgctgtttattgctttaacccacacatgttatttctggagatggt 260
Query: 61 gtggctcacggagagacgtctggggcagcccgatcacactccttcaggggcccctctgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtggctcacggagagacgtctggggcagcccgatcacactccttcaggggcccctctgcc 320
Query: 121 ttttttgggctcagagttctgaattgcacttttgacctcctcctgaacagcttgcaaggc 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttttgggctcagagctctgaattgcacttttgacctcctcctgaacagcttgcaaggc 380
Query: 181 acaattgagctgaagcaggacccccc-agctgctgctctgaatgtacggcctgtggcctg 239
|||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||
Sbjct: 381 acaattgagctgaagcaggacccccccagttgctgctctgaatgtacggtctgtggcctg 440
Query: 240 actttccatgtc 251
||||||||||||
Sbjct: 441 actttccatgtc 452
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 652
Length adjustment: 9
Effective length of query: 242
Effective length of database: 643
Effective search space: 155606
Effective search space used: 155606
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
