NTTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCATTCAATTTGCAAATGCTGCATCAAAATTAAAGACTTTTGCTT
TCAATGTTACCAGTGACATTTTTTGAATACCACAAACACACATGGATAAA
ATACACACACACACACACACACACACAGATATTCACACACAATTCACTTA
CTCTCATACACACAGAGAAAGATACATGTACACACATGCAAATAGACATA
TTCATATACACTCAGATTCTCTCATACACATGTGGATGCATAGCACACAC
ATGCTTACACACACACACACACACACACACACACACACAAACTGTCTAGA
TAAGTAAGTTATAACAAATGAAAGAAAAAGTAATAAAAAAGAAAATGAAT
TAAAAGAGCAGAGCATATTTTTTATATATTTTTATTAGGTATTTTCCTCA
TTTAAATTTCCAATGATATCCTAAAAGTCCCGCATACCCTCCCCCCCACT
CCCTTACCCACCCACTCCCACCTTTTGGCCCTGGCGTTCTCCTGTACTGG
GGCATAAAAAGTTTGCTAGTCCAATGGGCCTCTCTTTCCAGTGATGGCCG
ACTACATTTGCAGCTAGAGTCAAGAGCTCCAGGGTACTGGTTAGTTCATA
ATATTGTTCCACCTATATGGATGCAGATCCCCTTAGCTCCTTGGGTACTT
TCTCTAT

ATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTATCTCTCAGTAGTATAAAGAGTTAC
TGTGGAACTGAGCATTGATAAGAATTAAATAGGCGAGTAGAAGGCAAGTT
GAAGAGAGAATATGGGGAGGAATCAATAAAAAATAAAACTTTTGAAAACA
TCTTAAAGAAACTCACCATCTAGAACTTTCCATATAGATAAGTATACACA
TACCCTGTATATTCATTCATACTTATATATACAACTTTAAGTGTAGTTAT
CTCATGGAGCAAAAAAGCCTCTGATACACAATAAAGACTAACCAAAACAA
AATTAATTTAGAACTGGGTTGTTGTTTTAAGTTTGCTGGACACTGTGGTC
TGCTATACCCCTAAATATTACAGATGATATCAATTTTTTCTTCGCTACTT
TCAAGCACTTGAGAGTAAGACTTCACTTCTAAAAACATGACAAGTTTGAG
TCATGGAAAATTGAGAAGCTAAGTTGGTACTGAACTGGAAGCTTCGTTCT
ATTGGCTATCTTTCACCGTGTTGAGGCACCATGTAGCTTCTAGAAGATGA
AAATTGTCTTCTGTCACACCCAGGTATGAACCCTGCAAACTACAATAATC
TCTATCCTAGAAAGACCTTCCTGTTAGTGTTGTATTTCCATGAACCCCAT
GTGGGTAACAAACCATGTA

Query= MSMg01no104_b11.b1 MSMg01no104_b11.b1 CHROMAT_FILE:
MSMg01no104_b11.b1 PHD_FILE: MSMg01no104_b11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:03:13 2005
         (660 letters)



>mm_chr3_47687969_47689028
          Length = 1060

 Score = 1122 bits (580), Expect = 0.0
 Identities = 584/586 (99%), Gaps = 2/586 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcattcaatttgcaaatgctgcatcaaaattaaagacttttgctttcaatgttacc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 gaattcattcaatttgcaaatgctgcatcaaaattaaagacttttgctttcaatgttacc 527

                                                                       
Query: 65  agtgacattttttgaataccacaaacacacatggataaaatacacacacacacacacaca 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 agtgacattttttgaataccacaaacacacatggataaaatacacacacacacacacaca 467

                                                                       
Query: 125 cacacagatattcacacacaattcacttactctcatacacacagagaaagatacatgtac 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 cacacagatattcacacacaattcacttactctcatacacacagagaaagatacatgtac 407

                                                                       
Query: 185 acacatgcaaatagacatattcatatacactcagattctctcatacacatgtggatgcat 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 acacatgcaaatagacatattcatatacactcagattctctcatacacatgtggatgcat 347

                                                                       
Query: 245 agcacacacatgctt--acacacacacacacacacacacacacacacacaaactgtctag 302
           |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 agcacacacatgcttacacacacacacacacacacacacacacacacacaaactgtctag 287

                                                                       
Query: 303 ataagtaagttataacaaatgaaagaaaaagtaataaaaaagaaaatgaattaaaagagc 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ataagtaagttataacaaatgaaagaaaaagtaataaaaaagaaaatgaattaaaagagc 227

                                                                       
Query: 363 agagcatattttttatatatttttattaggtattttcctcatttaaatttccaatgatat 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 agagcatattttttatatatttttattaggtattttcctcatttaaatttccaatgatat 167

                                                                       
Query: 423 cctaaaagtcccgcataccctcccccccactcccttacccacccactcccaccttttggc 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 cctaaaagtcccgcataccctcccccccactcccttacccacccactcccaccttttggc 107

                                                                       
Query: 483 cctggcgttctcctgtactggggcataaaaagtttgctagtccaatgggcctctctttcc 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 cctggcgttctcctgtactggggcataaaaagtttgctagtccaatgggcctctctttcc 47

                                                         
Query: 543 agtgatggccgactacatttgcagctagagtcaagagctccagggt 588
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46  agtgatggccgactacatttgcagctagagtcaagagctccagggt 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 101
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1060
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1050
Effective search space:   682500
Effective search space used:   682500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)