Query= MSMg01no104_l13.b1 MSMg01no104_l13.b1 CHROMAT_FILE:
MSMg01no104_l13.b1 PHD_FILE: MSMg01no104_l13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:04:05 2005
(389 letters)
>mm_chr3_144024904_144025692
Length = 789
Score = 690 bits (357), Expect = 0.0
Identities = 378/385 (98%)
Strand = Plus / Minus
Query: 5 gaattcacccatctcccttctgtctggccagggacatgagaacgctctgatgatgcggtg 64
||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 gaattcatccatctcttttctgtctggccagggacatgagaacgctctgatgatgcggtg 530
Query: 65 cagaaactaacaggtaaatgaatgtagaatggccctggtattttgagatgatttctgctt 124
||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 529 cagaaactagtaggtaaatgaatgtagaatggccccggtattttgagatgatttctgctt 470
Query: 125 gctctatttagtagatttatttatttagatatatttagaacaattggttgttcattcatc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 gctctatttagtagatttatttatttagatatatttagaacaattggttgttcattcatc 410
Query: 185 aagcatttgtattcatgggaggcgctactgtatgcaagattttcatacaaagacagcaat 244
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 409 aagcatttgtattcatgggaggggctactgtatgcaagattttcatacaaagacagcaat 350
Query: 245 accaaacacaaacacccaacactttgacaataaaaatataggagtttgctgaaagattga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 accaaacacaaacacccaacactttgacaataaaaatataggagtttgctgaaagattga 290
Query: 305 tttttgcaaatgttcgagagagaaatccttggtcagaatctcacgtctctggcttctctc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 tttttgcaaatgttcgagagagaaatccttggtcagaatctcacgtctctggcttctctc 230
Query: 365 ttggaagaacccatctggaaagtca 389
|||||||||||||||||||||||||
Sbjct: 229 ttggaagaacccatctggaaagtca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 389
Length of database: 789
Length adjustment: 9
Effective length of query: 380
Effective length of database: 780
Effective search space: 296400
Effective search space used: 296400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no104_l13.g1 MSMg01no104_l13.g1 CHROMAT_FILE:
MSMg01no104_l13.g1 PHD_FILE: MSMg01no104_l13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:04:05 2005
(407 letters)
>mm_chr3_143856700_143857503
Length = 804
Score = 756 bits (391), Expect = 0.0
Identities = 402/407 (98%), Gaps = 3/407 (0%)
Strand = Plus / Plus
Query: 1 aaatggccattgatgagggctgtgggtctatcatgttcacaaaataaactgccattgatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaatggccattgatgagggctgtgggtctatcatgttcacaaaataaactgccattgatg 260
Query: 61 tagtgaaaccgatctcccgggaccaggcgattccggcaggtagaacatgtgaaacactgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagtgaaaccgatctcccgggaccaggcgattccggcaggtagaacatgtgaaacactgc 320
Query: 121 agaggaaaagagacccattgaaatcaacagcaacaactttacaggcagcttttaagcaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaggaaaagagacccattgaaatcaacagcaacaactttacaggcagcttttaagcaag 380
Query: 181 cgtctgtcaagtacaacaagattcaggctttggtgttttacttcctttgacatgatccca 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cgtctgtcaagtacaa---gattcaggctttggtgttttacttcctttgacatgatccca 437
Query: 241 gcaggcagcccaaacacagcctactggacagtctacaattaggaaggagaggacacatct 300
|||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gcagccagcccaaacacagtctactggacagtctacaattaggaaggagaggacacatct 497
Query: 301 tcgtgctaaaggaagtgtgcctatgtgtgccagggcaaccacagctatcacacactgtgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tcgtgctaaaggaagtgtgcctatgtgtgccagggcaaccacagctatcacacactgtgt 557
Query: 361 ccatcacagcgtttgtggtgtctgggacttgaagacaggactggtac 407
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ccatcacagcgtttgtggtgtctgggacttgaagacaggactggtac 604
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 407
Length of database: 804
Length adjustment: 9
Effective length of query: 398
Effective length of database: 795
Effective search space: 316410
Effective search space used: 316410
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
