TCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGTGGAA
TTCCAGAACATGACCCCTGTCAGTTGGAGGATCATCTATATACCACAGTT
TGAAGCTAAGATCTCTATGATCAGGCTGCTCCCAGCCTGGCACACCCTCA
TCAGTCTCTCCTTTCCTGACTTCAGGTAGAGTCTTTCTGAATCTACAATC
TAGATACTTCTCCAGTCATAAATCATTCATGCTAGTGCTTCTCATATGAC
TTTAGTCACAAAGATCTTCTTGTTCAACTTCAGCATCACTGACCTCTGCT
TTCACCTCCTGGTCAATCTGACTGTCCCTCTATCCATGTTCATTCCACGA
TACATTACTACTTACAATTATCTTCTTTTGACCGTTTCTGGTAGCGCTTC
ATGTATCCTATGCATGTCCCATAAACTGATCATGCGTTCTATCCTGCGTT
GATCCCCTAACCCTTTCCGTTTTTGCCTTTTAGGTTGCTGACCTCCCTTC
AAGCGTTCCCCTTTGTCCGCATACGCGTTCACCATCCATCTTCCTGCACG
TTAACCTTGCGCCGCCTGTCCAAATAACTTGATCTGTCCTTACCTTCATT
TTTCCCCTATTCACGTTTCCCCATACCTTCCCTTTTTCTTCTCCCTTACC
CATTTCTTTATACCTTCGTTTATCATACTTTTTTTTATAATGCCTCTCCT
TTCATTTGTCACTCTATT

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXCCCAGGAAGATGTGAATATGGCATATATTC
ACTGTAGTTATTAGAAATTATTTTTAGCATTTAATGCTTCAATATAGATT
ACTACACTCTCATAATATGCAGAACAAGCTCTCTTTGTATTTTATTTACA
GTTTAAAATCCTTAAAGATGCATCTATTGGATAATTTGCAAGATGGAAAT
TATTTTTATCATATTAGATTTATAGACACTTTAAGATTTATTGACTAATG
TTTAATATTAAACACAATGAGGCCTGAAGACACCTGAAACAAGATAGTAA
ATAAGTCAGTATGGAAGGTGCAGCAGACAAGGAAGGATGTCAGACCCCAA
AGCCAGACAGCCTCTAGTTGCCTTCCATCTGTGGGACTAAGGATGGCTTC
TATGGGGCCTGAGTCTTAAATGTGTTTCTCTCCTTAGAGTTCTGATTCAG
CTGTACTTTAGCAAAGGAGAATAGATTCAAAGTTTGTCTTCACTCTAAAA
TGCTGATAACACAACTTGGGGGTGAATGATTCCTTTTCTTCTAGTGAAGA
GCATTCTGTTCTGATGATGTTAAGTTCCTTAAAGCCATGAACAAGTTTGG
TCTGTCTATTCTGCATTCAACAACAGGCATAAAACCCAACATATAATGTG
TATCCAAAAAGTGCCCA

Query= MSMg01no104_m13.g1 MSMg01no104_m13.g1 CHROMAT_FILE:
MSMg01no104_m13.g1 PHD_FILE: MSMg01no104_m13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:04:10 2005
         (614 letters)



>mm_chr3_156963603_156964616
          Length = 1014

 Score = 1172 bits (606), Expect = 0.0
 Identities = 612/614 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cccaggaagatgtgaatatggcatatattcactgtagttattagaaattatttttagcat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cccaggaagatgtgaatatggcatatattcactgtagttattagaaattatttttagcat 260

                                                                       
Query: 61  ttaatgcttcaatatagattactacactctcataatatgcagaacaagctctctttgtat 120
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaatgcttcaatatagatttctacactctcataatatgcagaacaagctctctttgtat 320

                                                                       
Query: 121 tttatttacagtttaaaatccttaaagatgcatctattggataatttgcaagatggaaat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttatttacagtttaaaatccttaaagatgcatctattggataatttgcaagatggaaat 380

                                                                       
Query: 181 tatttttatcatattagatttatagacactttaagatttattgactaatgtttaatatta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatttttatcatattagatttatagacactttaagatttattgactaatgtttaatatta 440

                                                                       
Query: 241 aacacaatgaggcctgaagacacctgaaacaagatagtaaataagtcagtatggaaggtg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aacacaatgaggcctgaagacacctgaaacaagatagtaaataagtcagtatggaaggtg 500

                                                                       
Query: 301 cagcagacaaggaaggatgtcagaccccaaagccagacagcctctagttgccttccatct 360
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 501 cagcagacaaggaaggatgtcagaccccaaagccagacagcctctacttgccttccatct 560

                                                                       
Query: 361 gtgggactaaggatggcttctatggggcctgagtcttaaatgtgtttctctccttagagt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtgggactaaggatggcttctatggggcctgagtcttaaatgtgtttctctccttagagt 620

                                                                       
Query: 421 tctgattcagctgtactttagcaaaggagaatagattcaaagtttgtcttcactctaaaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tctgattcagctgtactttagcaaaggagaatagattcaaagtttgtcttcactctaaaa 680

                                                                       
Query: 481 tgctgataacacaacttgggggtgaatgattccttttcttctagtgaagagcattctgtt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgctgataacacaacttgggggtgaatgattccttttcttctagtgaagagcattctgtt 740

                                                                       
Query: 541 ctgatgatgttaagttccttaaagccatgaacaagtttggtctgtctattctgcattcaa 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ctgatgatgttaagttccttaaagccatgaacaagtttggtctgtctattctgcattcaa 800

                         
Query: 601 caacaggcataaaa 614
           ||||||||||||||
Sbjct: 801 caacaggcataaaa 814


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1014
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1004
Effective search space:   606416
Effective search space used:   606416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)