Query= MSMg01no110_o10.b1 MSMg01no110_o10.b1 CHROMAT_FILE:
MSMg01no110_o10.b1 PHD_FILE: MSMg01no110_o10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:14:38 2005
(563 letters)
>mm_chr3_79759959_79760921
Length = 963
Score = 1073 bits (555), Expect = 0.0
Identities = 558/559 (99%)
Strand = Plus / Plus
Query: 5 gaattcgggacaggcaagactggaaaggggtagataggcaagaagcctgtgagggaacag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcgggacaggcaagactggaaaggggtagataggcaagaagcctgtgagggaacag 264
Query: 65 gacaggcaagactggaaaggggtagataggcaagaagcctgtgagggaacaggataggca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gacaggcaagactggaaaggggtagataggcaagaagcctgtgagggaacaggataggca 324
Query: 125 agactggaaaggggtagataggcaagaagcctgtgagggaacaggataggcaagtttgga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agactggaaaggggtagataggcaagaagcctgtgagggaacaggataggcaagtttgga 384
Query: 185 agagaagagatgcagaatgagttcatatttattaagtctgagcaactgggtggggctatc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agagaagagatgcagaatgagttcatatttattaagtctgagcaactgggtggggctatc 444
Query: 245 aagattttaagaatggcctctgcattttggaattgagtagtcagtttcataacgatgctt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aagattttaagaatggcctctgcattttggaattgagtagtcagtttcataacgatgctt 504
Query: 305 gcccttcagcatctttcagggaaagatggatgaaaaatgatttggtaaataaaaacctaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gcccttcagcatctttcagggaaagatggatgaaaaatgatttggtaaataaaaacctaa 564
Query: 365 accactattttgtacaacacatgtgaacatgaattcaagtgtgggtctagaaaatagaga 424
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 565 accactattttgtacaacacatgtgaacatgcattcaagtgtgggtctagaaaatagaga 624
Query: 425 agcggtacacagtacataaagaccatcaggctccgactgttgggattttgatgggagatg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agcggtacacagtacataaagaccatcaggctccgactgttgggattttgatgggagatg 684
Query: 485 tgtctgctgtgatattgccctgggtcttattggttgtctggaagtcctttggcttctacc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tgtctgctgtgatattgccctgggtcttattggttgtctggaagtcctttggcttctacc 744
Query: 545 cacaatgagccagcagtgg 563
|||||||||||||||||||
Sbjct: 745 cacaatgagccagcagtgg 763
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 563
Length of database: 963
Length adjustment: 10
Effective length of query: 553
Effective length of database: 953
Effective search space: 527009
Effective search space used: 527009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no110_o10.g1 MSMg01no110_o10.g1 CHROMAT_FILE:
MSMg01no110_o10.g1 PHD_FILE: MSMg01no110_o10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:14:38 2005
(403 letters)
>mm_chr3_79862315_79863115
Length = 801
Score = 710 bits (367), Expect = 0.0
Identities = 395/405 (97%), Gaps = 5/405 (1%)
Strand = Plus / Minus
Query: 1 aaatgctgattcttaattcaaggtaataaaaaaatacatcgcatgacctagagagggcaa 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 536 aaatgctgattcttaattcaaggtaat-aaaaaatacatcgcatgacctagagagggcaa 478
Query: 61 agcacctatgctttcccaagtgtctctgtatgtcataaagtctcggctcttgcaaaaacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 agcacctatgctttcccaagtgtctctgtatgtcataaagtctcggctcttgcaaaaacc 418
Query: 121 tgaaggagaaacttttatcttctttgaaaaaactgttagtacaatttaattatcaatgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 tgaaggagaaacttttatcttctttgaaaaaactgttagtacaatttaattatcaatgaa 358
Query: 181 cagtgagcatcttaagttattctttaaatagaaaatctatataacaacacttatgctagc 240
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 357 cagtgagcatcttaagttattctttaaatagaacatctatataacaacacttatgctagc 298
Query: 241 tcagcatgtttaagagagcattgtgaagtaggtcactgagattctgtgggatttctgcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 tcagcatgtttaagagagcattgtgaagtaggtcactgagattctgtgggatttctgcct 238
Query: 301 ctttggagggagcagatgtttccttatttcatcctgagggtgggaaagacaggaaggaag 360
|||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||
Sbjct: 237 ctttggagggagcagatg-ttccttatatcatcctgagagtgggaaagacaggaaggaag 179
Query: 361 ggaaaaaaggaaggaaggaaggga-gaa--aaggaaggaaggaag 402
||| |||||||||||||||||| | ||| |||||||||||||||
Sbjct: 178 ggagaaaaggaaggaaggaaggaaggaaggaaggaaggaaggaag 134
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 403
Length of database: 801
Length adjustment: 9
Effective length of query: 394
Effective length of database: 792
Effective search space: 312048
Effective search space used: 312048
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
