NNNNNTTCTTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCATTATTTTTACTAACTGAGTAGTACTCTCTTGTGTAA
ATGTACCACATTTTCTGTATCAATTTCTCTGTTGAGGAGCATCTGGGTTC
TTTCCAGCTTCCAGCTATTATGAATAAGGATGCCATGGACATAGTGGAAC
ATGTGTCCTTGTTATATGTTGGAACATCTTTTGGGTATATGCCCAGGAGT
GGTATAGCTGGGATCTCAGGTAATACCATGTCCAATTTTCTGAGGAACTT
CCAACGTGATTTCCAGAGCAGTTGTACCAGCTTGCAATCCTATGGACAAT
GGAGGAGCGTTTCTCTTTCTCCACATTCTCACCAGCATCTTCTGTCACCT
CAGTTTTTGATCTTAGCAATTCTTACTGGTTTGAGGATAGCAAAACCTAT
TCTCAACAACAAAAGGTCTTCTGGGATAATCACCATCCCTAACATCAAGC
TGTATTTCAGAGCAATAGTCATAAAAACTGTATGGTATTGGTACAGAAAC
AGGCAGGAAGATCAATGAACTAGAATTGAAGACCCAGAAATGAACCGACC
AACCTATGGTCATTTGAGCTTTGACCAAGAGCTGAAACCATCTATTGGAC
AAAAGACTACATTTTCAACAAATGGTGATGTTTCAACTTGAGGTCCGTAT
GTAGAAGAATGCAAATAGACCCATTCTTATC

ATGAAGTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXACCATCATATTTTATGAAATGACAAAATAC
TTTATACAGGTAATAATTTATTCAAACAATTGAAACTATTACTCAAATAT
CATGATAAACTTGTGAAGATTTCTTTAGTTTCAGCCAATGACATATATAA
AACCTCTTATTAAATGTATAAGCCTAAACATATAAATATATGTATATCAC
TCTTATTTTTTATTTTATCATGTGGTCTGATATTAGTTGAGTAAAACAAG
TTTGATCCTTTATAACAGTCATTTAGTGTTCCAAATGCTTAAAAGACTAA
TCCTTGAATGAAGTAAATAAGAAATCTTTTATTAAATTATGTTTTATGAC
ATAATAATTTATAAATCTGGTTATATATATATCTAGTATGAAATGAAGAT
ATTTGGTAATCCACACCAGGCAGGATGGCTTTTTATGGCTATTATAGCTA
CCTATGTAAACACCTGCTGTGAAGAAAATTGCTTCCTAATTTAAAATTTC
TAAATTACGGTATTATACAATACTTGGAGAAAACAAAGGTCTTATGGAAT
GAAGGATAATAATATTAAATATTATATTGAACTGATATGAGAAAAGTGAC
ACTGGATAATTTTTAAAACAATATCTATATTATTATTTCTTCTAGGAAAG
TATTACCCTTTAAAGTTT

Query= MSMg01no110_p07.g1 MSMg01no110_p07.g1 CHROMAT_FILE:
MSMg01no110_p07.g1 PHD_FILE: MSMg01no110_p07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:14:42 2005
         (513 letters)



>mm_chr3_44697303_44698214
          Length = 912

 Score =  895 bits (463), Expect = 0.0
 Identities = 497/513 (96%), Gaps = 9/513 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   accatcatattttatgaaatgacaaaatactttatacaggtaataatttattcaaacaat 60
           |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 201 accatcatattttatgaaatgataaaatactttatacaggtaataatttattcaaataat 260

                                                                       
Query: 61  tgaaactattactcaaatatcatgataaacttgtgaagatttctttagtttcagccaatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgaaactattactcaaatatcatgataaacttgtgaagatttctttagtttcagccaatg 320

                                                                       
Query: 121 acatatataaaacctcttattaaatgtataagcctaaacatataaatatatgtatatcac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acatatataaaacctcttattaaatgtataagcctaaacatataaatatatgtatatcac 380

                                                                       
Query: 181 tcttattttttattttatcatgtggtctgatattagttgagtaaaacaagtttgatcctt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcttattttttattttatcatgtggtctgatattagttgagtaaaacaagtttgatcctt 440

                                                                       
Query: 241 tataacagtcatttagtgttccaaatgcttaaaagactaatccttgaatgaagtaaataa 300
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tataacagtcatttagtcttccaaatgcttaaaagactaatccttgaatgaagtaaataa 500

                                                                       
Query: 301 gaaatcttttattaaattatgttttatgacataataatttataaatctggttatatatat 360
           ||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||  
Sbjct: 501 gaaatctttcattaaattatgttttatgacatgataatttataaatctggt-atatat-- 557

                                                                       
Query: 361 atctagtatgaaatgaagatatttggtaatccacaccaggcaggatggctttttatggct 420
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ------tatgaaatgaagatatttggtaatccacaccaggcaggatggctttttatggct 611

                                                                       
Query: 421 attatagctacctatgtaaacacctgctgtgaagaaaattgcttcctaatttaaaatttc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 attatagctacctatgtaaacacctgctgtgaagaaaattgcttcctaatttaaaatttc 671

                                            
Query: 481 taaattacggtattatacaatacttggagaaaa 513
           |||||||| | ||||||||||||||||||||||
Sbjct: 672 taaattacagaattatacaatacttggagaaaa 704


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 912
Length adjustment: 10
Effective length of query: 503
Effective length of database: 902
Effective search space:   453706
Effective search space used:   453706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)