MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-112H19
Chromosome	3 (Build37)
Map Location	98,743,813 - 98,744,429
singlet/doublet	singlet
Overlap gene	none
Upstream gene	EG433632, LOC100042975, Notch2, Adam30, LOC622561, Reg4, Hmgcs2, Phgdh, Zfp697, LOC100043461, Hsd3b4, LOC100043456, EG545555, LOC676433, Hsd3b5, LOC668543, Hsd3b2, Hsd3b3, Hsd3b6, LOC545556, Hsd3b1, Hao3
Downstream gene	LOC668557, Wars2, Tbx15, M6pr-ps, Spag17
Link	Open Mouse BAC browser

Click to get alignment info.

name	EG433632 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433632 MGI:3648209
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042975 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042975
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Notch2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18129 MGI:97364
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Adam30 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71078 MGI:1918328
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC622561 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622561
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Reg4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67709 MGI:1914959
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hmgcs2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15360 MGI:101939
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Phgdh (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:236539 MGI:1355330
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp697 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:242109 MGI:2139736
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043461 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043461
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 63 ESTs, 20 Proteins

name	Hsd3b4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15495 MGI:96236
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043456 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043456
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 65 ESTs, 21 Proteins

name	EG545555 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:545555 MGI:3648707
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 436 ESTs, 6 Proteins pseudo : _no_value

name	LOC676433 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:676433
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Hsd3b5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15496 MGI:104645
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668543 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668543
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Hsd3b2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15493 MGI:96234
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hsd3b3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15494 MGI:96235
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hsd3b6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15497 MGI:109598
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC545556 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545556
definition	note : 14-3-3 protein eta pseudogene pseudo : _no_value

name	Hsd3b1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15492 MGI:96233
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hao3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56185 MGI:1860477
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668557 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668557
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Wars2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70560 MGI:1917810
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tbx15 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21384 MGI:1277234
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	M6pr-ps (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17114 MGI:96905
definition	note : mannose-6-phosphate receptor, pseudogene pseudo : _no_value

name	Spag17 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74362 MGI:1921612
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG433632 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801029 GeneID:433632 MGI:3648209
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG433632 transcript_id : NM_001033779.2

name	Notch2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134288852 GeneID:18129 MGI:97364
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Notch gene homolog 2 (Drosophila) transcript_id : NM_010928.2

name	Adam30 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33859703 GeneID:71078 MGI:1918328
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : a disintegrin and metallopeptidase domain 30 transcript_id : NM_027665.1

name	Reg4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13385823 GeneID:67709 MGI:1914959
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : regenerating islet-derived family, member 4 transcript_id : NM_026328.1

name	Hmgcs2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142349549 GeneID:15360 MGI:101939
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2 transcript_id : NM_008256.3

name	Phgdh (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:52353954 GeneID:236539 MGI:1355330
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 3-phosphoglycerate dehydrogenase transcript_id : NM_016966.3

name	Zfp697 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375486 GeneID:242109 MGI:2139736
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 697 transcript_id : NM_172863.3

name	LOC100043461 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251414 GeneID:100043461
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 60 ESTs, 19 Proteins product : similar to 3-beta-hydroxysteroid dehydrogenase/delta-5-delta-4-isomerase, transcript variant 2 transcript_id : XM_001480502.1

name	LOC100043461 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251412 GeneID:100043461
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 51 ESTs, 19 Proteins product : similar to 3-beta-hydroxysteroid dehydrogenase/delta-5-delta-4-isomerase, transcript variant 1 transcript_id : XM_001480498.1

name	LOC100043461 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251416 GeneID:100043461
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 43 ESTs, 2 Proteins product : similar to 3-beta-hydroxysteroid dehydrogenase/delta-5-delta-4-isomerase, transcript variant 3 transcript_id : XM_001480506.1

name	Hsd3b4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680290 GeneID:15495 MGI:96236
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 4 transcript_id : NM_008294.1

name	LOC100043456 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251408 GeneID:100043456
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 62 ESTs, 20 Proteins product : similar to 3-beta-hydroxysteroid dehydrogenase/delta-5-delta-4-isomerase, transcript variant 2 transcript_id : XM_001480492.1

name	LOC100043456 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251406 GeneID:100043456
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 53 ESTs, 20 Proteins product : similar to 3-beta-hydroxysteroid dehydrogenase/delta-5-delta-4-isomerase, transcript variant 1 transcript_id : XM_001480488.1

name	LOC100043456 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251410 GeneID:100043456
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 45 ESTs, 2 Proteins product : similar to 3-beta-hydroxysteroid dehydrogenase/delta-5-delta-4-isomerase, transcript variant 3 transcript_id : XM_001480494.1

name	Hsd3b5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113680666 GeneID:15496 MGI:104645
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 5 transcript_id : NM_008295.2

name	Hsd3b2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542968 GeneID:15493 MGI:96234
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2 transcript_id : NM_153193.2

name	Hsd3b3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:59858544 GeneID:15494 MGI:96235
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 3 transcript_id : NM_001012306.1

name	Hsd3b6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31980731 GeneID:15497 MGI:109598
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 6 transcript_id : NM_013821.2

name	Hsd3b1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142387492 GeneID:15492 MGI:96233
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 transcript_id : NM_008293.3

name	Hao3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142364954 GeneID:56185 MGI:1860477
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hydroxyacid oxidase (glycolate oxidase) 3 transcript_id : NM_019545.3

name	Wars2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142347914 GeneID:70560 MGI:1917810
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tryptophanyl tRNA synthetase 2 (mitochondrial) transcript_id : NM_027462.3

name	Tbx15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124286801 GeneID:21384 MGI:1277234
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : T-box 15 transcript_id : NM_009323.2

name	Spag17 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142384574 GeneID:74362 MGI:1921612
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sperm associated antigen 17 transcript_id : NM_028892.3

name	EG433632 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702089 GeneID:433632 MGI:3648209
definition	codon_start : 1 product : hypothetical protein LOC433632 protein_id : NP_001028951.1

name	Notch2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:134288853 GeneID:18129 MGI:97364
definition	GO_component : GO:0009986 - cell surface [Evidence ISS]; GO:0005887 - integral to plasma membrane [Evidence IC]; GO:0016020 - membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0003706 - ligand-regulated transcription factor activity [Evidence ISS]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006916 - anti-apoptosis [Evidence ISS]; GO:0007050 - cell cycle arrest [Evidence ISS]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0001709 - cell fate determination [Evidence TAS]; GO:0016049 - cell growth [Evidence ISS]; GO:0007368 - determination of left/right symmetry [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0030326 - embryonic limb morphogenesis [Evidence IGI]; GO:0030097 - hemopoiesis [Evidence ISS]; GO:0006917 - induction of apoptosis [Evidence ISS]; GO:0002011 - morphogenesis of an epithelial sheet [Evidence IMP]; GO:0008285 - negative regulation of cell proliferation [Evidence ISS]; GO:0007399 - nervous system development [Evidence ISS]; GO:0007219 - Notch signaling pathway [Evidence IEA] [Evidence IC]; GO:0009887 - organ morphogenesis [Evidence TAS]; GO:0043065 - positive regulation of apoptosis [Evidence IGI]; GO:0046579 - positive regulation of Ras protein signal transduction [Evidence ISS]; GO:0050793 - regulation of development [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0042060 - wound healing [Evidence IDA] codon_start : 1 note : Motch B product : Notch gene homolog 2 protein_id : NP_035058.2

name	Adam30 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859704 CCDS:CCDS17660.1 GeneID:71078 MGI:1918328
definition	GO_function : GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA] GO_process : GO:0007229 - integrin-mediated signaling pathway [Evidence IEA] codon_start : 1 product : a disintegrin and metalloproteinase domain 30 protein_id : NP_081941.1

name	Reg4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385824 CCDS:CCDS17661.1 GeneID:67709 MGI:1914959
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005615 - extracellular space [Evidence ISS] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation product : regenerating islet-derived family, member 4 protein_id : NP_080604.1

name	Hmgcs2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560689 CCDS:CCDS17662.1 GeneID:15360 MGI:101939
definition	GO_component : GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0004421 - hydroxymethylglutaryl-CoA synthase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006084 - acetyl-CoA metabolism [Evidence IEA]; GO:0006695 - cholesterol biosynthesis [Evidence IEA]; GO:0008610 - lipid biosynthesis [Evidence IEA]; GO:0006694 - steroid biosynthesis [Evidence IEA]; GO:0016126 - sterol biosynthesis [Evidence IEA] codon_start : 1 product : 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2 protein_id : NP_032282.2

name	Phgdh (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52353955 CCDS:CCDS17663.1 GeneID:236539 MGI:1355330
definition	GO_function : GO:0051287 - NAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0004617 - phosphoglycerate dehydrogenase activity [Evidence TAS] GO_process : GO:0008652 - amino acid biosynthesis [Evidence IEA]; GO:0006564 - L-serine biosynthesis [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : 3-phosphoglycerate dehyrogenase product : 3-phosphoglycerate dehydrogenase protein_id : NP_058662.2

name	Zfp697 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62461606 GeneID:242109 MGI:2139736
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : zinc finger protein 697 protein_id : NP_766451.2

name	LOC100043461 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251417 GeneID:100043461
definition	codon_start : 1 product : similar to 3-beta-hydroxysteroid dehydrogenase/delta-5-delta-4-isomerase isoform 3 protein_id : XP_001480556.1

name	LOC100043461 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251413 GeneID:100043461
definition	codon_start : 1 product : similar to 3-beta-hydroxysteroid dehydrogenase/delta-5-delta-4-isomerase isoform 1 protein_id : XP_001480548.1

name	LOC100043461 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251415 GeneID:100043461
definition	codon_start : 1 product : similar to 3-beta-hydroxysteroid dehydrogenase/delta-5-delta-4-isomerase isoform 2 protein_id : XP_001480552.1

name	Hsd3b4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680291 CCDS:CCDS17665.1 GeneID:15495 MGI:96236
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0003854 - 3-beta-hydroxy-delta5-steroid dehydrogenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0004769 - steroid delta-isomerase activity [Evidence IEA] GO_process : GO:0006700 - C21-steroid hormone biosynthesis [Evidence IEA]; GO:0006694 - steroid biosynthesis [Evidence IEA] codon_start : 1 function : NADPH dependent 3-ketosteroid reductase note : 3-beta-hydroxysteroid dehydrogenase/delta-5-delta-4 isomerase product : hydroxysteroid dehydrogenase-4, delta<5>-3-beta protein_id : NP_032320.1

name	LOC100043456 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251411 GeneID:100043456
definition	codon_start : 1 product : similar to 3-beta-hydroxysteroid dehydrogenase/delta-5-delta-4-isomerase isoform 3 protein_id : XP_001480544.1

name	LOC100043456 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251407 GeneID:100043456
definition	codon_start : 1 product : similar to 3-beta-hydroxysteroid dehydrogenase/delta-5-delta-4-isomerase isoform 1 protein_id : XP_001480538.1

name	LOC100043456 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251409 GeneID:100043456
definition	codon_start : 1 product : similar to 3-beta-hydroxysteroid dehydrogenase/delta-5-delta-4-isomerase isoform 2 protein_id : XP_001480542.1

name	Hsd3b5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113680667 CCDS:CCDS17666.1 GeneID:15496 MGI:104645
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0003854 - 3-beta-hydroxy-delta5-steroid dehydrogenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006700 - C21-steroid hormone biosynthesis [Evidence IEA]; GO:0006694 - steroid biosynthesis [Evidence IEA] codon_start : 1 note : 3(beta)HSDV product : hydroxysteroid dehydrogenase-5, delta<5>-3-beta protein_id : NP_032321.2

name	Hsd3b2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23397415 CCDS:CCDS17667.1 GeneID:15493 MGI:96234
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0003854 - 3-beta-hydroxy-delta5-steroid dehydrogenase activity [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0004769 - steroid delta-isomerase activity [Evidence IEA] GO_process : GO:0006700 - C21-steroid hormone biosynthesis [Evidence IEA]; GO:0006694 - steroid biosynthesis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hydroxysteroid dehydrogenase-2, delta<5>-3-beta protein_id : NP_694873.1

name	Hsd3b3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:59858545 CCDS:CCDS17668.1 GeneID:15494 MGI:96235
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0003854 - 3-beta-hydroxy-delta5-steroid dehydrogenase activity [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0004769 - steroid delta-isomerase activity [Evidence IEA] GO_process : GO:0006700 - C21-steroid hormone biosynthesis [Evidence IEA]; GO:0006694 - steroid biosynthesis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 3 protein_id : NP_001012306.1

name	Hsd3b6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305167 CCDS:CCDS17669.1 GeneID:15497 MGI:109598
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0003854 - 3-beta-hydroxy-delta5-steroid dehydrogenase activity [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0004769 - steroid delta-isomerase activity [Evidence IEA] GO_process : GO:0006700 - C21-steroid hormone biosynthesis [Evidence IEA]; GO:0006694 - steroid biosynthesis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : 3beta-HSD VI product : hydroxysteroid dehydrogenase-6, delta<5>-3-beta protein_id : NP_038849.1

name	Hsd3b1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680289 CCDS:CCDS17670.1 GeneID:15492 MGI:96233
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0003854 - 3-beta-hydroxy-delta5-steroid dehydrogenase activity [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0004769 - steroid delta-isomerase activity [Evidence IEA] GO_process : GO:0006700 - C21-steroid hormone biosynthesis [Evidence IEA]; GO:0006694 - steroid biosynthesis [Evidence IEA] codon_start : 1 product : hydroxysteroid dehydrogenase-1, delta<5>-3-beta protein_id : NP_032319.1

name	Hao3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980953 CCDS:CCDS17671.1 GeneID:56185 MGI:1860477
definition	GO_component : GO:0005777 - peroxisome [Evidence TAS] [Evidence IEA] GO_function : GO:0003973 - (S)-2-hydroxy-acid oxidase activity [Evidence TAS] [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0006631 - fatty acid metabolism [Evidence TAS] codon_start : 1 exception : mismatches in translation note : medium-chain 2-hydroxy acid oxidase HAOX3 product : hydroxyacid oxidase (glycolate oxidase) 3 protein_id : NP_062418.2

name	Wars2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543952 CCDS:CCDS17672.1 GeneID:70560 MGI:1917810
definition	GO_component : GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence IEA]; GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]; GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]; GO:0001570 - vasculogenesis [Evidence IDA] codon_start : 1 product : mitochondrial tryptophanyl tRNA synthetase 2 protein_id : NP_081738.2

name	Tbx15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124286802 CCDS:CCDS17673.1 GeneID:21384 MGI:1277234
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : droopy ear; T-box 14 product : T-box 15 protein_id : NP_033349.2

name	Spag17 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:56606047 GeneID:74362 MGI:1921612
definition	codon_start : 1 exception : mismatches in translation product : sperm associated antigen 17 protein_id : NP_083168.2

name	LOC100042975 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042975
definition	number : 1 pseudo : _no_value

name	LOC100042975 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042975
definition	number : 2 pseudo : _no_value

name	LOC100042975 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042975
definition	number : 3 pseudo : _no_value

name	LOC100042975 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042975
definition	number : 4 pseudo : _no_value

name	LOC622561 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:622561
definition	number : 1 pseudo : _no_value

name	LOC676433 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676433
definition	number : 3 pseudo : _no_value

name	LOC676433 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676433
definition	number : 2 pseudo : _no_value

name	LOC676433 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676433
definition	number : 1 pseudo : _no_value

name	LOC668543 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668543
definition	number : 3 pseudo : _no_value

name	LOC668543 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668543
definition	number : 2 pseudo : _no_value

name	LOC668543 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668543
definition	number : 1 pseudo : _no_value

name	LOC668557 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668557
definition	number : 1 pseudo : _no_value

name	EG545555 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149251418 GeneID:545555 MGI:3648707
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 436 ESTs, 6 Proteins product : predicted gene, EG545555 pseudo : _no_value transcript_id : XR_034745.1

clone name	MSMg01-205K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057E21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-470H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372P09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-427A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048K11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-048J11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-350P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264N16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-428C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048J02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-372P09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-295A12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-350P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500B14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-360I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003E16
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-112H19.T7 (MSMg01no112_h19.b1)	MSMg01-112H19.TJ (MSMg01no112_h19.g1)
ACC	AG324885	AG324886
length	731	720
length of high quality (start - end)	615 (46 - 660)	560 (75 - 634)
definition	CHROMAT_FILE: MSMg01no112_h19.b1 PHD_FILE: MSMg01no112_h19.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:17:39 2005	CHROMAT_FILE: MSMg01no112_h19.g1 PHD_FILE: MSMg01no112_h19.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:17:39 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG AATTCATTATGTTTCTCGGGGTAACTTAACTGTGTGGATTTATGCTAATA TGGTGGCCTCCTACCTCAGCAAGATGTGAGAACCTCCTCTCACTGAAGGG AGGCTGCAAGTCCTTAACCAGCCACTCCAGGGATGTTCTGGGAGAGAATA TGTGAAGGCTGCTGCTTCTCCAGATTTGAAAACAGAGCTCTGAATGGGGC CTCAGGGATGTTTTCAACCGAGGTCTAGGGACAGCAGGGGCTGGTGGGGG TGGATTAATCTACAGGAATTAAACTAACTGCGTTGGAGTGGCTTGCACTC AGAGCTCAACACAAAAGCTAAAGGAGTGTGTATGGTATTCACATGGCATC ATGGGCCTGACACTGTACACTTCTCCAGACCACCAACTAGGACACTGTAG TTGTATGTGTGGGCAGATGCTAACCATGGAAATACTATCCTTGTAACTAT AGAACAATATTAAGGGAGTTCCTCCAGCCATGCCTAAGTGCTCGCTTCTC ATCCGCAAGGATCAGTGTTGAGAAATAGTCGTCAAAGGGGCACGATGAAG CTGGTAGTCTCCCACCCAATCAGATGTAAAGATCCTATCCTAATTGATGT AAATGAAGACACTCACATTTTCTGACAATCAGACATGAGAATGGGAGACA AAAGGGAGAGGGAGAGGAGGCCTTTGTAAAN	CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXTTTGTTCAGCTCTGAGCTCCATTTTT TAATGGGGTTATTTGATTTTCTGGAGTCCACCTTCTTGAGATATATATAT ATATATATAGGATATTAATTAGTCCCCTATCTGATTTAGGATAGGTAAAG ATCCTTTCTAAAGCTGTACTACAGAGCAATTGTGATAAAAAAAAACTGCA TGGTACTGGTATAGCGACAGACAAGTAGACCAATGGAATAGAATTGAAGA CCCAGAGATGAACCCACACACCTATGGTCACTTGATCTTTGACAAGGGAG CTAAAACCATCCAGTGGAAAAAGACAGCATTTTCAACAAATGGTGCTGGC ACAACTGGTGGTTATCATGTAGAAGAATGTGAATTGATCCATTTCTATCT CCTTGTACTAAGGCCAAATCTAAGTGGATTAAGGAACTCCACATAAAACC AGAGACACTGAAACTTATAGAAGAAAAAGTAGGGGAAAACCTCGAAGATA TGGGTACAGGGGGGAAATTCCTAAATAGAACAGCAATGGCTTGTGCAGTA AGATTGAGAATCGATAAAGTTGCAAAGCTTCTGCAAGGCAAAAGACACCG TCCATAAGACAAAAAGACCACCAACAGATTGGGAAGTCAATGTTTTTAAT CGCTGCTACATACTCCATTG
quality values	Open. Hide. 8 8 8 8 8 15 20 41 41 41 37 37 37 32 32 37 37 33 33 33 37 39 44 48 59 31 31 31 30 29 21 21 9 9 9 9 9 10 15 18 16 18 21 22 22 28 37 59 59 36 36 38 36 53 36 36 33 33 50 50 42 43 28 25 9 9 9 9 9 9 23 28 41 41 47 50 50 50 50 50 53 53 53 59 59 37 37 47 47 47 47 53 50 50 57 57 68 68 68 68 57 57 57 57 57 57 59 68 68 68 68 68 68 68 68 50 50 47 47 47 57 57 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 59 57 57 57 57 54 57 59 59 59 68 68 68 68 68 57 57 57 57 54 54 59 59 59 57 57 57 57 50 46 46 48 48 48 50 59 59 59 59 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 59 59 57 59 59 59 59 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 57 57 57 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 68 62 62 52 52 52 62 62 52 52 52 62 62 62 62 62 62 62 62 62 62 68 62 62 62 62 68 62 62 62 52 52 52 52 52 52 62 62 62 62 62 62 62 62 68 68 68 68 68 68 62 62 62 62 62 62 62 68 68 68 68 68 68 68 59 59 59 59 59 59 59 57 57 57 52 52 52 59 59 59 59 59 57 57 57 52 52 52 52 52 57 57 57 52 59 59 57 57 57 57 57 57 59 57 57 59 59 59 59 59 59 59 57 59 59 59 57 57 52 57 57 57 68 68 50 50 42 42 43 57 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 44 50 42 42 42 42 35 42 42 43 37 46 37 37 37 39 42 43 43 43 44 32 44 42 43 42 48 39 48 48 57 57 57 47 43 43 47 47 48 48 54 59 54 54 54 57 47 43 43 43 43 43 48 48 47 43 43 43 43 47 47 48 48 48 48 48 57 48 48 48 48 57 48 48 48 59 59 47 47 47 47 41 41 37 37 41 41 43 59 59 47 47 48 48 48 48 37 59 39 39 43 47 57 57 48 48 48 59 59 48 48 48 59 57 54 57 54 54 48 59 59 59 59 59 59 59 59 54 48 44 43 43 43 37 40 30 28 22 22 22 37 43 43 43 43 43 43 46 43 48 44 46 32 32 23 31 41 42 36 19 19 14 14 16 35 35 35 43 28 28 23 37 37 57 43 37 32 28 28 23 32 28 37 35 39 37 37 32 30 27 27 32 37 37 39 43 39 31 31 31 27 30 30 30 25 28 28 27 25 32 30 18 15 15 16 19 20 19 25 12 12 11 21 21 28 22 24 28 28 25 22 22 19 17 23 18 12 12 12 12 12 20 23 15 15 12 18 24 22 16 20 23 19 26 16 16 16 24 26 19 22 22 24 24 22 16 16 12 12 12 21 19 24 25 22 22 34 30 28 18 10 6 6 6 6 3 0	Open. Hide. 6 6 9 10 11 11 10 10 22 17 35 32 37 41 41 42 50 50 50 50 53 53 50 50 50 50 50 47 41 28 14 10 6 6 6 6 6 13 12 17 17 29 29 41 43 43 44 27 23 14 14 14 26 26 57 57 53 48 43 37 36 36 23 26 17 19 19 34 23 42 42 42 42 47 68 68 68 68 51 51 51 50 50 50 68 68 68 68 68 68 68 50 50 48 48 48 51 59 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 50 51 51 51 51 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 62 62 62 62 62 62 62 68 62 62 68 62 62 62 62 62 62 62 52 52 52 62 62 68 68 68 68 68 68 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 62 62 52 52 52 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 52 52 62 62 62 62 62 62 68 68 68 68 68 57 57 57 57 57 52 57 57 59 44 44 31 31 31 44 44 57 57 59 57 57 57 57 57 57 57 59 59 57 57 57 43 57 43 43 44 33 33 35 57 57 54 57 57 59 59 59 57 57 57 57 57 57 68 68 59 57 57 57 57 57 57 68 68 68 59 57 57 57 57 57 68 68 68 68 68 68 68 57 57 57 59 59 57 57 54 57 57 57 57 57 57 44 37 43 44 57 57 57 57 57 57 54 54 54 47 46 44 43 43 57 57 39 39 42 42 32 32 30 42 42 57 57 57 57 57 59 59 59 59 59 43 43 43 43 43 48 48 48 54 54 48 54 54 43 47 43 43 43 40 40 43 43 39 39 35 39 39 57 43 43 43 43 43 43 39 39 39 39 37 37 35 31 31 35 36 39 30 33 33 33 33 33 48 43 43 47 47 48 48 48 48 48 39 39 36 39 37 37 35 32 31 32 32 39 39 37 41 41 48 48 48 48 37 37 30 37 37 37 37 41 37 37 37 37 37 39 39 41 37 37 40 43 37 37 31 31 31 37 41 44 59 31 31 24 18 13 19 27 27 24 14 14 15 23 26 28 28 25 25 22 29 21 14 11 11 14 17 26 21 14 14 14 17 17 33 33 35 37 26 14 10 10 10 12 11 17 12 12 12 24 21 29 29 34 31 29 27 21 19 14 14 14 21 28 19 22 26 24 27 28 31 32 37 37 39 33 37 33 31 31 25 28 28 37 43 30 27 20 24 22 24 20

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no112_h19.b1 MSMg01no112_h19.b1 CHROMAT_FILE:
MSMg01no112_h19.b1 PHD_FILE: MSMg01no112_h19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:17:39 2005
         (615 letters)



>mm_chr3_98743552_98744566
          Length = 1015

 Score = 1102 bits (570), Expect = 0.0
 Identities = 603/618 (97%), Gaps = 8/618 (1%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcattatgtttctcggggtaacttaactgtgtggatttatgctaatatggtgg--- 61
           ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||   
Sbjct: 878 gaattcattatgtttct-ggggtaacttagctgtgtggatttatgctaatatggtggcct 820

                                                                       
Query: 62  ----cctcctacctcagcaagatgtgagaacctcctctcactgaagggaggctgcaagtc 117
               ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 actacctcctatctcagcaagatgtgagaacctcctctcactgaagggaggctgcaagtc 760

                                                                       
Query: 118 cttaaccagccactccagggatgttctgggagagaatatgtgaaggctgctgcttctcca 177
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 cttagccagccactccagggatgttctgggagagaatatgtgaaggctgctgcttctcca 700

                                                                       
Query: 178 gatttgaaaacagagctctgaatggggcctcagggatgttttcaaccgaggtctagggac 237
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 gatttgaaaacagagctctgaatggggcctcagggatgttttcaaccgaggtctagggac 640

                                                                       
Query: 238 agcaggggctggtgggggtggattaatctacaggaattaaactaactgcgttggagtggc 297
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 agcaggggctggtgggggtggattaatctacaggaattaaactaactgcgttggagtggc 580

                                                                       
Query: 298 ttgcactcagagctcaacacaaaagctaaaggagtgtgtatggtattcacatggcatcat 357
            ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 579 atgcactcagagctcaacacaaaagctaaaggagtgtgtatggtgttcacatggcatcat 520

                                                                       
Query: 358 gggcctgacactgtacacttctccagaccaccaactaggacactgtagttgtatgtgtgg 417
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 519 gggcctgacactgtacacttctccagacaaccaactaggacactgtagttgtatgtgtgg 460

                                                                       
Query: 418 gcagatgctaaccatggaaatactatccttgtaactatagaacaatattaagggagttcc 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 gcagatgctaaccatggaaatactatccttgtaactatagaacaatattaagggagttcc 400

                                                                       
Query: 478 tccagccatgcctaagtgctcgcttctcatccgcaaggatcagtgttgagaaatagtcgt 537
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 tccagccatgcctaagtgctcgcttctcatccgcaaggatcagtgttgagaaatagtcgt 340

                                                                       
Query: 538 caaaggggcacgatgaagctggtagtctcccacccaatcagatgtaaagatcctatccta 597
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 339 caaaggggcacgatgaagctggcagtctcccacccaatcagatgtaaagatcctatccta 280

                             
Query: 598 attgatgtaaatgaagac 615
           ||||||||||||||||||
Sbjct: 279 attgatgtaaatgaagac 262


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1015
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1005
Effective search space:   608025
Effective search space used:   608025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information