Query= MSMg01no113_c15.b1 MSMg01no113_c15.b1 CHROMAT_FILE:
MSMg01no113_c15.b1 PHD_FILE: MSMg01no113_c15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:18:31 2005
(456 letters)
>mm_chr3_84388230_84389087
Length = 858
Score = 774 bits (400), Expect = 0.0
Identities = 437/456 (95%), Gaps = 12/456 (2%)
Strand = Plus / Minus
Query: 3 ggaattctatagcttgcctcgaacgaaggtctgcctgcctcttaagtgctgggattaaag 62
|||||||||||||| | |||||||||||||||| ||| ||||||||||||
Sbjct: 728 ggaattctatagctggtctcgaacgaaggtctggttgc----------ctgggattaaag 679
Query: 63 gcatgtgccaccaactggctcatctgggaacttaatatctttgtttactgaagattacac 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 gcatgtgccaccaactggctcatctgggaacttaatatctttgtttactgaagattacac 619
Query: 123 tgtgattagtaacctcaatatctgtccatgaagagaaacctactgatgaagagtgctgga 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 tgtgattagtaacctcaatatctgtccatgaagagaaacctactgatgaagagtgctgga 559
Query: 183 aattttgatacattatcagaattcccatagacaagatatagatgtagcaccagcagagaa 242
|||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 558 aattttgacacattatcagaattcccatagacaagatatggatgtagcaccagccgagaa 499
Query: 243 cctgtggcttatctccttcccttcctgatgataaaatgaaaggcaggcagtctactaatg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 cctgtggcttatctccttcccttcctgatgataaaatgaaaggcaggcagtctactaatg 439
Query: 303 tcctctacaactccagggaataaagagtatataactttgcaaaaggtgaatacattatct 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tcctctacaactccagggaataaagagtatataactttgcaaaaggtgaatacattatct 379
Query: 363 ccatgtcatgattatatgtgacagcaaattcttt--tcttacctctctgatcatatatat 420
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 378 ccatgtcatgattatatgtgacagcaaattcttttctcttacctctctgatcatatatat 319
Query: 421 caaccgggaggaataggaatcttttattctttctaa 456
||||||||||||||||||||||||||||||||||||
Sbjct: 318 caaccgggaggaataggaatcttttattctttctaa 283
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 858
Length adjustment: 10
Effective length of query: 446
Effective length of database: 848
Effective search space: 378208
Effective search space used: 378208
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no113_c15.g1 MSMg01no113_c15.g1 CHROMAT_FILE:
MSMg01no113_c15.g1 PHD_FILE: MSMg01no113_c15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:18:31 2005
(327 letters)
>mm_chr3_84241024_84241751
Length = 728
Score = 572 bits (296), Expect = e-168
Identities = 317/324 (97%), Gaps = 1/324 (0%)
Strand = Plus / Plus
Query: 1 tccactggaggaggaag-aaaaataaaatgtatttcaggtcagtgacctgcccaaggtct 59
||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 201 tccactggaggaggaagcaaaaattaaatgtatttcaggtcagtgacctgcccaaggtct 260
Query: 60 cagccagatagggtgtcgatcatggggcagttatggagtctgctggcccctctgcttgcc 119
|||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 261 cagccagatagggtgtcggtcatggggcagttatggagtctgctggcccctctgcctgcc 320
Query: 120 acatagaggtctctcaaaacgtttccatcctgtgggcatagctggagccagcctgactca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acatagaggtctctcaaaacgtttccatcctgtgggcatagctggagccagcctgactca 380
Query: 180 ctcatcccctactgccccaatgggggtgccatatctgggctctgacctggtaccagtgac 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctcatcccctactgccccaatgggggtgccatatctgggctctgacctggtaccagtgac 440
Query: 240 aaacaatcctgctttgagactgtcgtgttctgtggagctgctctaagggcagctccgtga 299
||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 441 aaacaatcctgctttcagactgtcatgttctgtggagctgctctaagggcagctccgtga 500
Query: 300 gctggtgtgctggcaacgacaatt 323
||||||||||| ||||||||||||
Sbjct: 501 gctggtgtgcttgcaacgacaatt 524
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 728
Length adjustment: 9
Effective length of query: 318
Effective length of database: 719
Effective search space: 228642
Effective search space used: 228642
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
