Query= MSMg01no115_c12.b1 MSMg01no115_c12.b1 CHROMAT_FILE:
MSMg01no115_c12.b1 PHD_FILE: MSMg01no115_c12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:21:02 2005
(441 letters)
>mm_chr3_151456036_151456877
Length = 842
Score = 758 bits (392), Expect = 0.0
Identities = 428/440 (97%), Gaps = 5/440 (1%)
Strand = Plus / Plus
Query: 5 gaattcacttcctacacttctgagaactaataaactgatattgaggtgccagtccatccc 64
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacttcctacacttcagagaactaataaactgatattgaggtgccagtccatccc 264
Query: 65 gtgtctggtgaaggcctgcatccatatttgaaaatagccatcttctccttaactcttcac 124
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 265 gtgtctggtgaaggcctgcatccatatttgaaaatagctatcttctccttaactcttcac 324
Query: 125 acagaggacacaagagaaagacagcccctctcttgtctcttcttatatgggtagtaattc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 acagaggacacaagagaaagacagcccctctcttgtctcttcttatatgggtagtaattc 384
Query: 185 cactgtcgggctccaccctggtcaccccatgtacccagttaccaacaaagtccctacctc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cactgtcgggctccaccctggtcaccccatgtacccagttaccaacaaagtccctacctc 444
Query: 245 catcttcaactacagtgggggttggagttttagtatctgaatatagggaaatgctaatat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 catcttcaactacagtgggggttggagttttagtatctgaatatagggaaatgctaatat 504
Query: 305 gctcagttcatatcactgt-gcttaatatc-gcttagcactattttttt-aaagtcagtt 361
|||||||||||||||| || | || ||| | |||||||||||||||||| ||||||||||
Sbjct: 505 gctcagttcatatcaccgttg-ttgata-ctgcttagcactattttttttaaagtcagtt 562
Query: 362 tttcagagcttcctagaaaccaaccaattatctcaggtacatagattatggtgatataga 421
|||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||
Sbjct: 563 tttcagagcttcctagaaaccaaccaattacctcgggtacatagattacggtgatataga 622
Query: 422 tataggtatagatatagata 441
||||||||||||||||||||
Sbjct: 623 tataggtatagatatagata 642
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 842
Length adjustment: 9
Effective length of query: 432
Effective length of database: 833
Effective search space: 359856
Effective search space used: 359856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no115_c12.g1 MSMg01no115_c12.g1 CHROMAT_FILE:
MSMg01no115_c12.g1 PHD_FILE: MSMg01no115_c12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:21:02 2005
(477 letters)
>mm_chr3_151571739_151572612
Length = 874
Score = 675 bits (349), Expect = 0.0
Identities = 387/403 (96%), Gaps = 8/403 (1%)
Strand = Plus / Minus
Query: 1 aatgtacctgcgatttgatggtgttaaactgttcaataaaaaaacaacaacacacaatga 60
|||||||||| |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 396 aatgtacctgtgatttgatggtgttaaactgttcaataaaa----aacaacacacaatga 341
Query: 61 gaaccaggattcttaggcttgtaagtggtgccccaggcttgttgcactcatgacatgact 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gaaccaggattcttagacttgtaagtggtgccccaggcttgttgcactcatgacatgact 281
Query: 121 taacatgaaccatatgcctgtgatttgtgttctgcagaacaacaattcttcacagaggag 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 280 taacatgaaccatatgcctgtgatttgtgttctgcagaacaacagttcttcacagaggag 221
Query: 181 ggattttt-gctctcacttgccccagtgtaccactgcaactgttagggacattttggggt 239
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 ggattttttgctctcacttgccccagtgtaccactgcaactgttagggacattttggggt 161
Query: 240 atcactaatggtaaatgcaggatggcagtgggctgtaagaggaacttagtgtatagaggc 299
||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 160 atcactactggtagatgcaggatggcagtgggctgtaagaggaacttactgtatagaggc 101
Query: 300 ctgggatttttttttttttaaacatcatataacacacagaaccaccatcctccaggacag 359
||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 100 ctgggatttatttttt---aaacatcatatagcacacagaaccaccatcctccaggacag 44
Query: 360 gaattaccttacctggtcccaaatgtcactgccatcatgttga 402
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 gaattaccttacctggtcccaaatgtcactgccatcatgttga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 874
Length adjustment: 10
Effective length of query: 467
Effective length of database: 864
Effective search space: 403488
Effective search space used: 403488
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
