MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-115E06
Chromosome	3 (Build37)
Map Location	80,195,549 - 80,196,140
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100041793, LOC667613, Ppid, Etfdh, 4930579G24Rik, Rxfp1, Tmem144, 1110032E23Rik
Downstream gene	EG626797, Gria2, Glrb, EG626841, Pdgfc
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100041793 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041793
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC667613 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667613
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Ppid (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67738 MGI:1914988
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Etfdh (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66841 MGI:106100
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930579G24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75939 MGI:1923189
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 70 ESTs, 2 Proteins

name	Rxfp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381489 MGI:2682211
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmem144 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70652 MGI:1917902
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1110032E23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68659 MGI:1915909
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG626797 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:626797 MGI:3644992
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	Gria2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14800 MGI:95809
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Glrb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14658 MGI:95751
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG626841 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:626841 MGI:3648932
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 79 ESTs, 1 Protein

name	Pdgfc (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54635 MGI:1859631
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041793 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251226 GeneID:100041793
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041793 transcript_id : XM_001477014.1

name	Ppid (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129817 GeneID:67738 MGI:1914988
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : peptidylprolyl isomerase D (cyclophilin D) transcript_id : NM_026352.3

name	Etfdh (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21313289 GeneID:66841 MGI:106100
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : electron transferring flavoprotein, dehydrogenase transcript_id : NM_025794.1

name	4930579G24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94369671 GeneID:75939 MGI:1923189
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 70 ESTs, 2 Proteins product : RIKEN cDNA 4930579G24 gene transcript_id : XM_485257.3

name	Rxfp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47059054 GeneID:381489 MGI:2682211
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : relaxin/insulin-like family peptide receptor 1 transcript_id : NM_212452.1

name	Tmem144 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142373726 GeneID:70652 MGI:1917902
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 144 transcript_id : NM_027495.3

name	1110032E23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134032027 GeneID:68659 MGI:1915909
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1110032E23 gene transcript_id : NM_133187.2

name	EG626797 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149251228 GeneID:626797 MGI:3644992
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : predicted gene, EG626797 transcript_id : XM_899578.3

name	Gria2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:139394521 GeneID:14800 MGI:95809
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamate receptor, ionotropic, AMPA2 (alpha 2) transcript_id : NM_001083806.1

name	Gria2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85861223 GeneID:14800 MGI:95809
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamate receptor, ionotropic, AMPA2 (alpha 2) transcript_id : NM_013540.2

name	Gria2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85861219 GeneID:14800 MGI:95809
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamate receptor, ionotropic, AMPA2 (alpha 2) transcript_id : NM_001039195.1

name	Glrb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367600 GeneID:14658 MGI:95751
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glycine receptor, beta subunit transcript_id : NM_010298.4

name	EG626841 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149251230 GeneID:626841 MGI:3648932
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 79 ESTs, 1 Protein product : predicted gene, EG626841 transcript_id : XM_891450.3

name	Pdgfc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560372 GeneID:54635 MGI:1859631
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : platelet-derived growth factor, C polypeptide transcript_id : NM_019971.2

name	LOC100041793 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251227 GeneID:100041793
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477064.1

name	Ppid (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385854 CCDS:CCDS17417.1 GeneID:67738 MGI:1914988
definition	GO_function : GO:0005488 - binding [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA]; GO:0042277 - peptide binding [Evidence IEA] GO_process : GO:0006457 - protein folding [Evidence IEA] codon_start : 1 product : peptidylprolyl isomerase D protein_id : NP_080628.1

name	Etfdh (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313290 CCDS:CCDS17418.1 GeneID:66841 MGI:106100
definition	GO_component : GO:0017133 - electron transfer flavoprotein complex (sensu Eukaryota) [Evidence TAS]; GO:0016020 - membrane [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : electron transferring flavoprotein, dehydrogenase protein_id : NP_080070.1

name	4930579G24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51708173 GeneID:75939 MGI:1923189
definition	codon_start : 1 product : hypothetical protein LOC75939 protein_id : XP_485257.1

name	Rxfp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47059055 CCDS:CCDS17420.1 GeneID:381489 MGI:2682211
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence ISS]; GO:0042562 - hormone binding [Evidence IDA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0030198 - extracellular matrix organization and biogenesis [Evidence IMP]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007188 - G-protein signaling, coupled to cAMP nucleotide second messenger [Evidence IDA]; GO:0030879 - mammary gland development [Evidence IMP]; GO:0007567 - parturition [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : leucine-rich repeat-containing 7; relaxin family peptide receptor 1 product : leucine-rich repeat-containing G protein-coupled receptor 7 protein_id : NP_997617.1

name	Tmem144 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560098 CCDS:CCDS17421.1 GeneID:70652 MGI:1917902
definition	codon_start : 1 product : hypothetical protein LOC70652 protein_id : NP_081771.2

name	1110032E23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:134032028 CCDS:CCDS17422.1 GeneID:68659 MGI:1915909
definition	codon_start : 1 product : hypothetical protein LOC68659 protein_id : NP_573450.2

name	EG626797 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149251229 GeneID:626797 MGI:3644992
definition	codon_start : 1 product : hypothetical protein protein_id : XP_904671.3

name	Gria2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:139394522 GeneID:14800 MGI:95809
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IDA]; GO:0045211 - postsynaptic membrane [Evidence IEA] GO_function : GO:0005234 - glutamate-gated ion channel activity [Evidence IDA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0004970 - ionotropic glutamate receptor activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0007268 - synaptic transmission [Evidence IDA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform 3 is encoded by transcript variant 3; AMPA selective glutamate receptor; glutamate receptor B; glutamate receptor 2 product : glutamate receptor, ionotropic, AMPA 2 isoform 3 protein_id : NP_001077275.1

name	Gria2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85861224 CCDS:CCDS17423.1 GeneID:14800 MGI:95809
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IDA]; GO:0045211 - postsynaptic membrane [Evidence IEA] GO_function : GO:0005234 - glutamate-gated ion channel activity [Evidence IDA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0004970 - ionotropic glutamate receptor activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0007268 - synaptic transmission [Evidence IDA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform 2 is encoded by transcript variant 2; AMPA selective glutamate receptor; glutamate receptor B; glutamate receptor 2 product : glutamate receptor, ionotropic, AMPA 2 isoform 2 protein_id : NP_038568.2

name	Gria2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85861220 GeneID:14800 MGI:95809
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IDA]; GO:0045211 - postsynaptic membrane [Evidence IEA] GO_function : GO:0005234 - glutamate-gated ion channel activity [Evidence IDA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0004970 - ionotropic glutamate receptor activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0007268 - synaptic transmission [Evidence IDA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform 1 is encoded by transcript variant 1; AMPA selective glutamate receptor; glutamate receptor B; glutamate receptor 2 product : glutamate receptor, ionotropic, AMPA 2 isoform 1 protein_id : NP_001034284.1

name	Glrb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981754 CCDS:CCDS17424.1 GeneID:14658 MGI:95751
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0045211 - postsynaptic membrane [Evidence IEA] GO_function : GO:0005254 - chloride channel activity [Evidence IEA]; GO:0031404 - chloride ion binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]; GO:0005230 - extracellular ligand-gated ion channel activity [Evidence IEA]; GO:0016934 - glycine-gated chloride channel activity [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0030594 - neurotransmitter receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA] GO_process : GO:0006821 - chloride transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0006278 - RNA-dependent DNA replication [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : inhibitory glycine receptor; glycine receptor beta subunit product : glycine receptor, beta subunit protein_id : NP_034428.2

name	EG626841 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149251231 GeneID:626841 MGI:3648932
definition	codon_start : 1 product : similar to adenosine triphosphatase protein_id : XP_896543.2

name	Pdgfc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10242385 CCDS:CCDS17425.1 GeneID:54635 MGI:1859631
definition	GO_component : GO:0005576 - extracellular region [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008083 - growth factor activity [Evidence IEA]; GO:0005161 - platelet-derived growth factor receptor binding [Evidence IDA] GO_process : GO:0008283 - cell proliferation [Evidence IEA]; GO:0009887 - organ morphogenesis [Evidence IMP] [Evidence IGI]; GO:0048008 - platelet-derived growth factor receptor signaling pathway [Evidence IDA]; GO:0008284 - positive regulation of cell proliferation [Evidence IDA]; GO:0050730 - regulation of peptidyl-tyrosine phosphorylation [Evidence IDA]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA]; GO:0007171 - transmembrane receptor protein tyrosine kinase activation (dimerization) [Evidence IDA] codon_start : 1 note : fallotein; platelet-derived growth factor c; platelet-derived growth factor, C polypeptide product : platelet-derived growth factor, C polypeptide protein_id : NP_064355.1

name	LOC667613 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667613
definition	number : 1 pseudo : _no_value

clone name	MSMg01-404I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-193C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-202B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-214E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062I18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-174I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344H20
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-115E06.T7 (MSMg01no115_e06.b1)	MSMg01-115E06.TJ (MSMg01no115_e06.g1)
ACC	AG326939	AG326940
length	1,299	726
length of high quality (start - end)	---	592 (79 - 670)
definition	CHROMAT_FILE: MSMg01no115_e06.b1 PHD_FILE: MSMg01no115_e06.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:21:10 2005	CHROMAT_FILE: MSMg01no115_e06.g1 PHD_FILE: MSMg01no115_e06.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:21:10 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	CTTTGTGTCCGCCGGCGTTTCGCCCCATCATTTATCGTTAGCGTGGGATG TGTCCGTGGTGCTGCGTATCGCTTCCGCGGCGGCGTGTTTTGGCCGCTCT GTTGGTGCGTCGTCGCTGGTTGTTTTTGACAATCTGTGTTAGCGGGCGTA GATATTATAGTCGGTTGGCGCCTTCGTATTTAGCCGTCTTTGTTGGTGAC GCGCTGTGTTTCGCTGAACGTGGCGGCGTGTACAGGGCGAGACGTCGGCT GGTTATTCGCTGCTGTTTGTTGCGNACCGGTACGTTCTGTATGCTGCGCA GTTTTTATTGACACTCTCGCGCGCGGGCGTCTCTCTGCGATGTCGCGGGC ATCGGCGGCACGGGCGTTATGTTACGCGCCTTGTATTCCGGCGGCGGCGC TGCCCGGTTGCGTGCATCGCGTGTTTGCGCCCGCAGTCGTCGCGAGGTAT GAGAGAGCGAAGGAGATCGGGGTGATGTAGAGAGCGTGTGGTGGTGTTGG CGTGTAATATCCGNGCGCCGCGCGGCGCGCGTGTTAGCTATGATATATCG GCGGTGGNGTTAGACTGCCGCGGCGCGGTTGCTGCGCGTGGTTTCGTCGT GCCGGCTGTCTCGCGCTTTCGTGTAGCTTCGTCCCGTCTTCAGTGTATTA TCGGGCCGCTGTATTTNTTTGCGTCTATGCCNACACGGCTGTTGGCGCCG GGCGTTCCTTACTATGGCGATATGTGTCGACCGTGTGGGACACTCGCGCT GTTTGTTTTGTCGCACGTTTATATTGTTCGCGCGTGCGCCGGCATCATCG TTTCCCGCGTATTTCGGGCGTGTTTCGTGCGTCGGTGATTATTCTGGTAC AAACCGTGCGGGGTGTCGTCGCTCTTTTGTGTCGGCGCGTGTTTGGTACT CCGTCGGGTTCGCCCTCTTCTATGACGCGCGTATTATCCNCGGTGTGTTA TACGCCGTATTTATTCGCGCGAGTCCGGCGTACTGTATTCTACCTCCGAT TGCGTGCGTGTCTGATGGAGGANGCGCGGCACGTGGTCTTGGTATATCAG ACGGGTCGCCATAGTCGTTCTCTCACCCGCGTGTTTTTCTCGATCGTGAC GTTGTGGTGGCACGCTACTCACACGTGTCGCTATCTCGTCTATTAGTGTC GTGTGGTCGCTGTCGTTGGCTCGCGACGCTCGCGACGTCGTCCCGCCGCG TGTATAAGCGTAAGCTGGTAGGCGTATCGATGCACGTCTAAATGAACGGA TTGTTGCGTGTAGCCGTCGCGAAAAGGGTGGTACTGAACATGAGAGGGG	NNNNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXATCGAACAGAGTTTGACGTCTT GTTCTAAGGGCGAACAGGAGAAAACTACTGTCTTCCAGACAACTAGGAGG AGAGTCGAAAAGCCCACCCCCACAGTGACACACTTCCTGCAACAAGGCCA CATCTATTCCAACAAGAACATACCTCCTAATTGTGCCCCTCCCTGGGCCA AGCATACTCAAACCACCACAGATATATTTCTTCCCATGTTTGTTTCATTT ATCCTTATAATTCAAAAGGAAGGAAAAAGTTAAGTAACATTGACCTAATC CTTTTTCAATTTTATCAATTAAATAACAGTGAATGTTTATGACAGTAAAA ACAGGCAAGCATTTATTCTAGTATGTATTCCTCCATGTGGATGGAATGTT GACTTAGGGCTGTGCATAAATAGGCAAGTATGTTTGTGTAAACTGGCATT TAAGGTTATAATTGAGCAATTATTGTAAATGTTGCTTGCATTTCCTCAGA TGTAGGAATGAGATGAGAGTCCTACCCAAACTGTGTCAATATACTACATG GCTTGGTCTAAGCCGAGAAAATTTCTTTCTCTGTTCCAATTATTTCTAGA CCTATGTCTGGAAGCTTCTAGCCTGCATGTAACCCAATCTTCCAAGCTGA CTGATTTAATCCAGCTTCTCTTGCCT
quality values	Open. Hide. 9 9 10 9 9 9 8 8 10 10 10 8 8 8 6 8 8 8 12 13 10 10 10 10 6 8 6 6 8 6 6 10 7 8 9 8 6 6 6 6 6 6 8 9 12 9 8 8 8 6 8 6 6 6 6 6 8 8 8 8 8 8 8 8 8 10 8 8 8 8 11 8 8 8 8 8 8 8 8 8 6 8 8 8 8 8 10 8 9 10 8 8 7 7 7 8 8 8 8 9 9 9 9 9 10 10 9 9 8 10 10 8 8 6 8 6 6 8 7 8 8 8 10 10 13 11 11 10 10 10 10 10 6 6 6 6 8 19 11 8 8 8 9 8 8 8 8 6 6 8 8 9 8 8 8 8 10 9 11 9 8 8 8 7 6 6 6 10 10 8 8 8 8 8 8 8 9 10 10 10 8 11 8 8 8 8 10 11 10 10 6 6 8 6 8 8 8 6 6 8 8 10 13 11 11 11 13 9 9 9 9 8 8 9 8 6 6 6 6 6 9 11 13 8 8 8 8 8 8 8 6 6 6 6 8 8 9 7 7 8 6 6 6 8 10 8 8 8 8 8 8 6 6 6 6 8 8 12 8 8 10 10 10 9 8 8 14 9 8 6 6 6 6 3 0 3 8 7 7 7 6 10 8 8 8 8 6 6 6 6 6 6 10 6 6 6 6 6 8 10 10 10 13 14 8 8 8 8 6 6 8 6 6 8 8 11 10 10 11 10 12 10 8 7 7 8 7 7 12 10 10 8 8 8 8 8 10 11 8 8 8 8 8 8 8 8 8 8 6 7 7 7 6 6 8 8 8 9 9 7 9 10 10 10 9 9 12 6 6 6 6 8 8 10 9 6 6 6 6 7 7 11 11 8 8 8 8 6 6 6 7 6 8 8 10 10 10 10 8 6 8 8 8 12 10 11 12 10 10 10 12 7 6 6 7 8 8 8 10 12 10 10 10 8 8 6 6 6 6 8 6 10 10 10 9 6 6 8 8 10 8 8 8 8 8 11 12 10 6 6 8 8 6 6 8 8 8 9 9 9 9 9 9 9 9 9 8 8 8 9 11 10 12 12 12 12 11 11 11 10 10 10 10 10 13 8 8 8 7 7 6 6 6 7 7 8 8 8 6 8 6 6 10 8 6 6 13 8 9 11 9 10 3 0 3 6 8 6 8 8 8 8 8 8 9 9 9 9 9 12 10 10 8 8 8 8 10 6 6 6 6 6 6 13 19 20 20 17 10 7 6 6 8 6 7 7 3 0 3 8 8 8 8 8 6 6 6 8 7 9 8 9 9 9 8 8 8 8 8 8 6 9 9 8 8 8 8 8 8 8 8 10 8 8 8 8 10 9 8 8 6 6 10 8 8 8 6 6 8 8 13 18 8 8 6 6 8 8 10 8 8 8 8 6 6 6 6 8 8 8 8 8 6 6 8 8 8 9 9 6 6 6 6 8 8 7 7 7 7 7 7 7 9 10 10 10 9 8 6 6 7 6 6 6 8 3 0 3 8 8 8 8 9 8 10 8 6 6 8 8 3 0 3 6 8 8 8 6 6 6 6 8 8 10 10 8 8 8 8 8 8 8 8 8 12 8 10 10 10 10 10 11 9 8 8 10 10 8 8 8 8 8 6 6 6 8 8 10 9 9 10 15 12 8 8 8 8 8 8 9 10 8 8 10 8 8 10 6 6 6 6 8 10 16 17 17 16 24 13 13 12 21 19 8 6 6 6 6 6 8 10 8 8 8 8 8 8 8 8 8 10 10 14 12 12 12 10 12 10 10 11 11 11 11 11 8 8 6 6 6 6 6 8 8 8 8 8 8 6 6 6 6 8 10 9 9 10 7 7 8 10 10 12 10 9 10 8 8 6 6 6 6 6 6 12 8 8 6 8 6 6 10 8 10 11 8 8 7 9 9 8 6 8 8 8 8 8 8 8 8 10 8 6 6 6 6 8 8 10 8 11 8 8 10 8 8 9 10 9 9 11 11 11 13 8 12 7 6 6 6 8 8 11 13 11 15 8 6 6 6 8 8 6 6 6 8 8 8 10 9 11 8 8 8 8 8 8 8 9 10 10 10 11 9 9 8 8 8 8 10 8 8 8 8 8 8 8 8 3 0 3 8 8 8 6 8 6 7 8 12 7 6 6 6 6 6 6 6 6 6 11 8 8 8 8 8 8 8 10 10 10 10 9 8 8 8 8 8 8 11 6 6 8 8 8 6 6 8 8 10 12 8 8 6 6 8 6 6 6 6 6 6 6 6 9 11 11 11 12 12 8 6 6 6 6 6 8 8 8 8 8 3 0 3 8 8 6 7 7 9 8 8 8 8 8 8 8 8 8 6 6 8 8 10 10 13 10 10 6 6 6 6 8 8 8 8 10 8 9 9 9 9 10 10 10 8 8 8 10 8 8 8 8 8 8 8 8 11 8 8 6 6 6 6 10 8 10 8 8 8 8 8 10 9 10 10 11 10 8 6 6 6 6 6 6 8 8 6 6 6 6 8 10 8 8 8 8 8 8 9 10 9 9 9 9 8 8 9 9 9 10 11 11 10 6 6 6 6 6 8 8 6 6 6 6 6 6 6 8 7 7 7 8 8 8 9 9 13 9 9 8 6 6 6 8 8 10 12 9 8 8 6 6 6 6 8 8 8 8 6 6 8 8 10 10 10 10 10 8 8 8 8 8 10 8 8 6 6 6 6 6 8 8 10 12 12 9 9 10 11 12 9 7 7 10 8 8 7 7 6 6 6 9 9 9 6 6 7 6 6 6 8 7 7 6 6 8 8 10 13 9 6 6 6 6 8 6 6 8 7 8 8 8 9 10 9 8 8 8 8 8 6 6 8 6 8 8 10 8 8 8 10 8 10 13 10 7 6 7 7 8 8 9 6 6 8 8 8 8 8 8 8 10 6 6 6 6 7 7	Open. Hide. 0 0 0 0 3 6 6 10 15 8 8 8 8 15 18 11 11 10 21 22 33 33 33 48 48 47 47 50 53 53 48 48 47 37 25 20 10 9 9 9 9 9 11 12 21 21 33 33 33 33 36 36 36 36 50 36 38 50 50 50 53 53 53 50 50 50 42 42 42 42 42 42 42 42 42 47 47 47 47 50 50 68 50 50 50 50 50 50 51 51 51 51 68 51 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 50 50 50 50 50 68 68 68 68 68 68 68 57 57 50 50 47 57 57 57 50 51 51 51 50 50 68 68 68 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 52 52 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 43 43 39 35 35 43 43 57 59 59 59 59 57 57 57 59 57 57 57 57 57 59 59 57 57 57 59 59 59 68 68 68 68 68 59 59 59 59 57 57 57 59 59 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 57 59 59 59 57 52 52 52 57 59 59 54 57 52 52 59 59 57 57 57 57 57 57 54 54 57 57 57 68 57 57 57 57 54 57 59 59 59 68 68 57 57 57 48 48 57 57 57 57 57 57 57 57 59 59 59 57 57 57 57 59 59 59 57 59 59 59 59 54 59 54 57 57 57 57 57 57 57 57 57 59 59 59 59 57 57 57 57 57 57 57 48 48 48 57 57 57 57 57 59 47 40 40 40 43 43 48 48 48 48 48 46 46 46 59 47 41 41 37 37 41 41 41 37 37 37 37 39 37 37 39 37 31 39 35 35 35 28 26 14 14 14 21 34 39 41 43 41 47 37 37 30 25 17 18 24 24 24 24 37 41 41 41 59 47 47 41 41 41 37 37 41 37 37 30 30 30 32 31 29 29 29 35 32 34 32 23 23 14 14 14 19 28 22 22 22 28 28 15 10 9 9 9 11 30 41 47 47 47 29 23 18 17 17 19 37 37 37 30 31 22 25 22 20 19 10 9 10 11 9 8 15 17 30 25 25 32 36 32 17 9 8 8 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no115_e06.g1 MSMg01no115_e06.g1 CHROMAT_FILE:
MSMg01no115_e06.g1 PHD_FILE: MSMg01no115_e06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:21:10 2005
         (592 letters)



>mm_chr3_80195304_80196295
          Length = 992

 Score = 1145 bits (592), Expect = 0.0
 Identities = 592/592 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atcgaacagagtttgacgtcttgttctaagggcgaacaggagaaaactactgtcttccag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 atcgaacagagtttgacgtcttgttctaagggcgaacaggagaaaactactgtcttccag 778

                                                                       
Query: 61  acaactaggaggagagtcgaaaagcccacccccacagtgacacacttcctgcaacaaggc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 acaactaggaggagagtcgaaaagcccacccccacagtgacacacttcctgcaacaaggc 718

                                                                       
Query: 121 cacatctattccaacaagaacatacctcctaattgtgcccctccctgggccaagcatact 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 cacatctattccaacaagaacatacctcctaattgtgcccctccctgggccaagcatact 658

                                                                       
Query: 181 caaaccaccacagatatatttcttcccatgtttgtttcatttatccttataattcaaaag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 caaaccaccacagatatatttcttcccatgtttgtttcatttatccttataattcaaaag 598

                                                                       
Query: 241 gaaggaaaaagttaagtaacattgacctaatcctttttcaattttatcaattaaataaca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 gaaggaaaaagttaagtaacattgacctaatcctttttcaattttatcaattaaataaca 538

                                                                       
Query: 301 gtgaatgtttatgacagtaaaaacaggcaagcatttattctagtatgtattcctccatgt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 gtgaatgtttatgacagtaaaaacaggcaagcatttattctagtatgtattcctccatgt 478

                                                                       
Query: 361 ggatggaatgttgacttagggctgtgcataaataggcaagtatgtttgtgtaaactggca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 ggatggaatgttgacttagggctgtgcataaataggcaagtatgtttgtgtaaactggca 418

                                                                       
Query: 421 tttaaggttataattgagcaattattgtaaatgttgcttgcatttcctcagatgtaggaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 tttaaggttataattgagcaattattgtaaatgttgcttgcatttcctcagatgtaggaa 358

                                                                       
Query: 481 tgagatgagagtcctacccaaactgtgtcaatatactacatggcttggtctaagccgaga 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tgagatgagagtcctacccaaactgtgtcaatatactacatggcttggtctaagccgaga 298

                                                               
Query: 541 aaatttctttctctgttccaattatttctagacctatgtctggaagcttcta 592
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 aaatttctttctctgttccaattatttctagacctatgtctggaagcttcta 246


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 992
Length adjustment: 10
Effective length of query: 582
Effective length of database: 982
Effective search space:   571524
Effective search space used:   571524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information