GGGTTGCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTTTGTTCAGTTCCGAGCCCCATTTTTTAGTGGGGTTATT
TGATTTCTGGAGTCCACCTTCTTGAGTTCTTTATATATATTGGATATTAG
TCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTG
GTCTTTTTGTCTTATTGACGGTGTCTTTTGCCTTACAGAAACTTTGCAGT
TTCATGAGGTCCCATTTGTCAATCCTTGATCTTACAGCACAAACCATTGC
TGTTCTATTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCC
CCACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCC
TTGATCCACTTAGATTTGACCTTAGTACAAGAAGATAGGTATGGATCGAT
TGGCATTCTTCTACATGATAACAACCAGTTGTGCCAGCACCATTTGTTGA
AAATGCTGTCTTTCTTTCACTGGACGGTTTTAGCTCCCTTGTCAAAGATC
AAGTGACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCA
TTGATCTACTTGTCTGTCACTATACCAGTACCATGCAGTTTTTTATCACA
ATTGCTCTGTAGTAAAGCTTTAGGTCAGGCATGGTGATTCCACCAGAGGT
TCTTTTATCCTTGAGAAGA

NNNTTCGATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTGTGGTTCTGTTAAGTCATTCC
AGCTGCTTGGCAAGTCCCTGAAAGGCCCTCACTCACCAAGCCGGCTACAA
AAAGTGAGCTTCAAAGCTGCCTAGGTGTTCTTCCAAGCCTGAAAAGTGTG
TCCCTGTGCTGTTGTGGACAGTGCACACTCATACTCATTCCTAATGGTCA
GGGAGGCCTGTGATGCTCTGGCTGTGGGTATTTGTGAAAGATCTGTTGGG
AGCTGTCCATCTCAGCCAAAAAGGATGGGAGATTGGCAGCATCTGCTACC
AGCCCATAGCCAGAGACCATGGCAGTGGAACAATCACAGATGCATCCTTG
CCGAGGGGTGGACGACTATGCTATGGGTCTGCCACAAAACCTCAGCCAAG
GCACTGGCTAGACTCCACAACTGAATCTGTGGACTGTAGACTGGGATGGT
GCTATATTATGTTCCATGCCCCTGATTCTGTGGGTGTTGTGGCTTAAGTT
CAAGAGACAAAGGATAAGGAGCTAAACTTATAAAAGTGGTAGGCAAATAG
CTCCACTCTAAGCCCTCATTTATCTAGGAGAAAATTGTGTATGACCTCAC
ATACACACTGGCAATCACCAACAGCTCAACAAAGCCTGTCAGTTCTAGCT
GGTGTCAATAGACACAAAA

Query= MSMg01no116_e12.g1 MSMg01no116_e12.g1 CHROMAT_FILE:
MSMg01no116_e12.g1 PHD_FILE: MSMg01no116_e12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:22:30 2005
         (550 letters)



>mm_chr3_67689846_67690795
          Length = 950

 Score = 1040 bits (538), Expect = 0.0
 Identities = 547/550 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgtggttctgttaagtcattccagctgcttggcaagtccctgaaaggccctcactcacca 60
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 750 tgtggttctgttaagtcattccagctgcttgccaagtccctgaaaggccctcactcacca 691

                                                                       
Query: 61  agccggctacaaaaagtgagcttcaaagctgcctaggtgttcttccaagcctgaaaagtg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 agccggctacaaaaagtgagcttcaaagctgcctaggtgttcttccaagcctgaaaagtg 631

                                                                       
Query: 121 tgtccctgtgctgttgtggacagtgcacactcatactcattcctaatggtcagggaggcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 tgtccctgtgctgttgtggacagtgcacactcatactcattcctaatggtcagggaggcc 571

                                                                       
Query: 181 tgtgatgctctggctgtgggtatttgtgaaagatctgttgggagctgtccatctcagcca 240
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 570 tgtgatgctctggctgtgggtatttgtgaaagatctgttgggagctgtccatctcaacca 511

                                                                       
Query: 241 aaaaggatgggagattggcagcatctgctaccagcccatagccagagaccatggcagtgg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 aaaaggatgggagattggcagcatctgctaccagcccatagccagagaccatggcagtgg 451

                                                                       
Query: 301 aacaatcacagatgcatccttgccgaggggtggacgactatgctatgggtctgccacaaa 360
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 450 aacaatcacagatgcatccttgccgaggggtggacaactatgctatgggtctgccacaaa 391

                                                                       
Query: 361 acctcagccaaggcactggctagactccacaactgaatctgtggactgtagactgggatg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 acctcagccaaggcactggctagactccacaactgaatctgtggactgtagactgggatg 331

                                                                       
Query: 421 gtgctatattatgttccatgcccctgattctgtgggtgttgtggcttaagttcaagagac 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 gtgctatattatgttccatgcccctgattctgtgggtgttgtggcttaagttcaagagac 271

                                                                       
Query: 481 aaaggataaggagctaaacttataaaagtggtaggcaaatagctccactctaagccctca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 aaaggataaggagctaaacttataaaagtggtaggcaaatagctccactctaagccctca 211

                     
Query: 541 tttatctagg 550
           ||||||||||
Sbjct: 210 tttatctagg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 950
Length adjustment: 10
Effective length of query: 540
Effective length of database: 940
Effective search space:   507600
Effective search space used:   507600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)