Query= MSMg01no117_l01.b1 MSMg01no117_l01.b1 CHROMAT_FILE:
MSMg01no117_l01.b1 PHD_FILE: MSMg01no117_l01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:19 2005
(632 letters)
>mm_chr3_48981411_48982443
Length = 1033
Score = 1216 bits (629), Expect = 0.0
Identities = 632/633 (99%), Gaps = 1/633 (0%)
Strand = Plus / Plus
Query: 1 aataaataaaaatggcagtgtgttccagtggaattacatattgaggtattatctattctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aataaataaaaatggcagtgtgttccagtggaattacatattgaggtattatctattctg 260
Query: 61 gaaaaaaaa-cagttctttgttttcttttttttttaaagaaaatgcaacaaatataaaac 119
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaaaaaaatcagttctttgttttcttttttttttaaagaaaatgcaacaaatataaaac 320
Query: 120 agactctttactgtctgtctaacaagtgctgtctagttagtttatcatgactgcattaat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agactctttactgtctgtctaacaagtgctgtctagttagtttatcatgactgcattaat 380
Query: 180 aatctcataattctagtttctgaaggccgtatgctgatggcactttatagactgaacatt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatctcataattctagtttctgaaggccgtatgctgatggcactttatagactgaacatt 440
Query: 240 ctctatgttttggctttttagcttagtcatatataagatgcctgattaggaaaacacgaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctctatgttttggctttttagcttagtcatatataagatgcctgattaggaaaacacgaa 500
Query: 300 taatagtctattaggcaaaaataaatgttcaattattgcagtaataaacaaccccaatag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taatagtctattaggcaaaaataaatgttcaattattgcagtaataaacaaccccaatag 560
Query: 360 gaaataaaactttggttctcttttggtgttccagatttatgaagggatgtaatatggtat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaaataaaactttggttctcttttggtgttccagatttatgaagggatgtaatatggtat 620
Query: 420 attgtgtataaatctgaataaagtctggcctttgaattaataaagaataatgaacagaaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 attgtgtataaatctgaataaagtctggcctttgaattaataaagaataatgaacagaaa 680
Query: 480 aaaatatataaaactgaccatggaacagatattgaaggtgaataagatatttttggacat 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaaatatataaaactgaccatggaacagatattgaaggtgaataagatatttttggacat 740
Query: 540 ttaaactactgctttgaattggaaatttaattgaaaatgaatcattaagtagtatacatc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttaaactactgctttgaattggaaatttaattgaaaatgaatcattaagtagtatacatc 800
Query: 600 caaagttgtatacttttccttaaatcaaaccag 632
|||||||||||||||||||||||||||||||||
Sbjct: 801 caaagttgtatacttttccttaaatcaaaccag 833
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1033
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1023
Effective search space: 636306
Effective search space used: 636306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no117_l01.g1 MSMg01no117_l01.g1 CHROMAT_FILE:
MSMg01no117_l01.g1 PHD_FILE: MSMg01no117_l01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:19 2005
(631 letters)
>mm_chr3_49094834_49095864
Length = 1031
Score = 1220 bits (631), Expect = 0.0
Identities = 631/631 (100%)
Strand = Plus / Minus
Query: 1 actcattcataccacacaagcatatgattatgtttagaagaattttttcataaaattact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 actcattcataccacacaagcatatgattatgtttagaagaattttttcataaaattact 772
Query: 61 tacatgctttcatttttctagtcttgaactgctagttgacaatcttgttcacaaacccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 tacatgctttcatttttctagtcttgaactgctagttgacaatcttgttcacaaacccct 712
Query: 121 ttagcaagaactgctgtatctgttagcaatgtttataatatttaggaagagaggatacat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 ttagcaagaactgctgtatctgttagcaatgtttataatatttaggaagagaggatacat 652
Query: 181 atatatgtgataatttacctttcattaatcaaaatagtggaaatcataaaactattaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 atatatgtgataatttacctttcattaatcaaaatagtggaaatcataaaactattaact 592
Query: 241 ttagaaataatctgtgtgtttctcaggagaagggatttactattctgtattcctttttaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 ttagaaataatctgtgtgtttctcaggagaagggatttactattctgtattcctttttaa 532
Query: 301 acattgttaatatctctagaaatcttgggatgatctcaggacttttcataaaacagcata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 acattgttaatatctctagaaatcttgggatgatctcaggacttttcataaaacagcata 472
Query: 361 ttagcaactatatattgtcaattgtgcaaaacttaggtggctctcagactatagtaatta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 ttagcaactatatattgtcaattgtgcaaaacttaggtggctctcagactatagtaatta 412
Query: 421 attagtgaatattaaatacattaaaattttcttattgaaaacaattattaaaagattgta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 attagtgaatattaaatacattaaaattttcttattgaaaacaattattaaaagattgta 352
Query: 481 ttagttacaatgtcacagattaataggttttaaaattgatgtatatagagtaaggtgttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ttagttacaatgtcacagattaataggttttaaaattgatgtatatagagtaaggtgttt 292
Query: 541 tgaggcatgtgcttgtaatcttagtacttgtgaacagacatgcagaatgatgggaacttc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 tgaggcatgtgcttgtaatcttagtacttgtgaacagacatgcagaatgatgggaacttc 232
Query: 601 agtccagtctgctccacacaatgatgcccag 631
|||||||||||||||||||||||||||||||
Sbjct: 231 agtccagtctgctccacacaatgatgcccag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1031
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1021
Effective search space: 634041
Effective search space used: 634041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
