TCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTTGTTCTTCTCTGAGCCCCATTTTTTAATGGGGTTATTTGATTTT
CTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCCT
ATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTTT
TTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCATT
AGGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTCT
GTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCACTT
TCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGATC
CACTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCGATTCGCAT
TCTTCTACACGATAACAACCAGTTGTGCCAGCACCAATTGTTGAAAATGC
TGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAGTGA
CCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTGGTC
TACTTGTCTGTCTCTATACCAGTACCATGCAGTTTTTATCACAATTGCTC
TGTAGTAAAGCTTTAGGTCTGGCATGGTGATTCCGCCAGAAGTTCTTTTA
TCCTTGAGAAGACTTTTTGCTATCCTAG

CGATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXACAGAGCCTGGAGGTCCAAAAGC
AATTACTTGAACAAGGGTCTTCCTTTTGGCTGCAGCATCAGCAGTAGTCT
CTCGTGTGACTTTTCACTCGAGAAAAGTTCTAGTTGAATGAGTCATTTTC
TTTCTAGGCCAAAAAGTAGAATTGCTGAAATCCTTAGGGTGAAACTTTAG
AGCAGTGTTTCAAAACTGAAAACGTGTAATTTCAGCCAATCACATCTCTG
CTTGGCTTACACACACAAAGCTTCCCAGTTGACAAATATAGCAAGGGCTC
AAAATAGACAGAGCTGTGGTGGCGATGAAATCTCTCACACTCATAGGCAA
CGTTTCTAGTAGACTCCAGAAACAGCAAATGCACAAAAGCAAGAGATTAT
TTCATGTTGGTATATTGGGGGAAGAAGCCTGCTAGGTCTCACACACACAC
ACACACACACACACACACACACACATACACACACACACACAAAGTTTGGA
CCCTTAAATACTAAATAGCATTATCAACCAAAGCTCTAAGTGGGACAAAC
AATGGAATATGGGAGTCACTTAAAAATACTTTATGAAATTAAAGTACATA
AGAATTTATGGAAATTGAATGGCTGTTGTAGGGACAGATCATATAGTATT
GGCCTGTCAATAAACGTACGGCCTATCT

Query= MSMg01no117_o10.g1 MSMg01no117_o10.g1 CHROMAT_FILE:
MSMg01no117_o10.g1 PHD_FILE: MSMg01no117_o10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:35 2005
         (649 letters)



>mm_chr3_66501771_66502820
          Length = 1050

 Score = 1160 bits (600), Expect = 0.0
 Identities = 632/650 (97%), Gaps = 13/650 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   acagagcctggaggtccaaaagcaattacttgaacaagggtcttccttttggctgcagca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagagcctggaggtccaaaagcaattacttgaacaagggtcttccttttggctgcagca 260

                                                                       
Query: 61  tcagcagtagtctctcgtgtgacttttcactcgagaaaag-ttctagttgaatgagtcat 119
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 tcagcagtagtctctcgtgtgacttttcactcgagaaaagattctagttgaatgagtcat 320

                                                                       
Query: 120 tttctttctaggccaaaaagtagaattgctgaaatccttagggtgaaactttagagcagt 179
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 tttctttctaggccaaaaagtagaattgctgaaatccttagggtgaaactttggagcagt 380

                                                                       
Query: 180 gtttcaaaactgaaaacgtgtaatttcagccaatcacatctctgcttggcttacacacac 239
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 381 gtttcaaaactgaaaacgtgtaatttcagccaatcacatctctgcatggcttacacacac 440

                                                                       
Query: 240 aaagcttcccagttgacaaatatagcaagggctcaaaatagacagagctgtggtggcgat 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaagcttcccagttgacaaatatagcaagggctcaaaatagacagagctgtggtggcgat 500

                                                                       
Query: 300 gaaatctctcacactcataggcaacgtttctagtagactccagaaacagcaaatgcacaa 359
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaaatctctcacactcataggcagcgtttctagtagactccagaaacagcaaatgcacaa 560

                                                                       
Query: 360 aagcaagagattatttcatgttggtatattgggggaagaagcctgctaggtctcacacac 419
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagcaagagatcatttcatgttggtatattgggggaagaagcctgctaggtctcacacac 620

                                                                       
Query: 420 acacacacacacacacacacacacacacatacacacacacacacaaagtttggaccctta 479
           |||||||||||||||||||||||||||||            |||||||||||||||||||
Sbjct: 621 acacacacacacacacacacacacacaca------------cacaaagtttggaccctta 668

                                                                       
Query: 480 aatactaaatagcattatcaaccaaagctctaagtgggacaaacaatggaatatgggagt 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 aatactaaatagcattatcaaccaaagctctaagtgggacaaacaatggaatatgggagt 728

                                                                       
Query: 540 cacttaaaaatactttatgaaattaaagtacataagaatttatggaaattgaatggctgt 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 cacttaaaaatactttatgaaattaaagtacataagaatttatggaaattgaatggctgt 788

                                                             
Query: 600 tgtagggacagatcatatagtattggcctgtcaataaacgtacggcctat 649
           ||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 789 tgtagggacagatcatatagtattggcctgtcaataaacttacggcctat 838


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 47
Number of extensions: 13
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1050
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1040
Effective search space:   664560
Effective search space used:   664560
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)