Query= MSMg01no118_a07.b1 MSMg01no118_a07.b1 CHROMAT_FILE:
MSMg01no118_a07.b1 PHD_FILE: MSMg01no118_a07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:44 2005
(644 letters)
>mm_chr3_127787163_127788209
Length = 1047
Score = 1191 bits (616), Expect = 0.0
Identities = 635/646 (98%), Gaps = 9/646 (1%)
Strand = Plus / Plus
Query: 5 gaattcaggaccacttctcataccagaagagatgtttcactgcataagtatgggtaatga 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaggaccacttttcataccagaagagatgtttcactgcataagtatgggtaatga 264
Query: 65 tgttgcagaggacctgtgcttggttcatagcacacatgttggatggctcacacttcctgt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgttgcagaggacctgtgcttggttcatagcacacatgttggatggctcacacttcctgt 324
Query: 125 gactacaggaggatctgatgtctctggcttccttggatacttgctcacttgtgcatgcaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gactacaggaggatctgatgtctctggcttccttggatacttgctcacttgtgcatgcaa 384
Query: 185 atatcctctcatccattcatataatccaagtttcattattttacctacttaattataatg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atatcctctcatccattcatataatccaagtttcattattttacctacttaattataatg 444
Query: 245 ttttctactaaatattattttcaaattaagggattttgtgcattccaagattgtttgaaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttttctactaaatattattttcaaattaagggattttgtgcattccaagattgtttgaaa 504
Query: 305 gtctactaattgattaaaaacttttaatgatcctatgtagtgtatataataaaatacttt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtctactaattgattaaaaacttttaatgatcctatgtagtgtatataataaaatacttt 564
Query: 365 gctgttttgtcactaatctgtgtaaaaatattccactgccttaattaaaaaataataata 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gctgttttgtcactaatctgtgtaaaaatattccactgccttaattaaaaaataataata 624
Query: 425 atgaagtttgatgaaatacaactcactagttcttcattgagaaaggctgtcatgggaagt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 atgaagtttgatgaaatacaactcactagttcttcattgagaaaggctgtcatgggaagt 684
Query: 485 gaaatattatcttttccatcaggaaaccccactctctccatttcttattgttttacttat 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gaaatattatcttttccatcaggaaaccccactctctccatttcttattgttttacttat 744
Query: 545 aaaaataacaactatgtcagtcatttaaacatctgtggaacaggaag------ttctctg 598
||||||||||||||||||||||||||||||||||||||||||||||| | | |
Sbjct: 745 aaaaataacaactatgtcagtcatttaaacatctgtggaacaggaagagaaaat---cgg 801
Query: 599 ttttcagcctcattattcttaaaacacaaaacatttgtgactaaac 644
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 ttttcagcctcattattcttaaaacacaaaacatttgtgactaaac 847
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1047
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1037
Effective search space: 657458
Effective search space used: 657458
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no118_a07.g1 MSMg01no118_a07.g1 CHROMAT_FILE:
MSMg01no118_a07.g1 PHD_FILE: MSMg01no118_a07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:44 2005
(173 letters)
>mm_chr3_127931287_127931859
Length = 573
Score = 311 bits (161), Expect = 1e-89
Identities = 170/173 (98%)
Strand = Plus / Minus
Query: 1 aatacagtgtcagagaactgccagagtttgtcttcccctgagaagcaagggttccccttc 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 373 aatacagtgtcagagaactgccagagtttgtcttcccctgacaagcaagggttccccttc 314
Query: 61 cctgggagtcagcacttcctatctgtttccgtgctgtattacagagggaaatgatttctt 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 313 cctgggagtcagcacttcctatctgtttccgtgctgtattgcagagggaaatgatttctt 254
Query: 121 tccttgacactgagaaacctttggttgccttggattcttccttgctctcttag 173
|| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 tctttgacactgagaaacctttggttgccttggattcttccttgctctcttag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 173
Length of database: 573
Length adjustment: 8
Effective length of query: 165
Effective length of database: 565
Effective search space: 93225
Effective search space used: 93225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
