Query= MSMg01no118_k18.b1 MSMg01no118_k18.b1 CHROMAT_FILE:
MSMg01no118_k18.b1 PHD_FILE: MSMg01no118_k18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:25:36 2005
(219 letters)
>mm_chr3_120976025_120976645
Length = 621
Score = 406 bits (210), Expect = e-118
Identities = 217/220 (98%), Gaps = 2/220 (0%)
Strand = Plus / Minus
Query: 2 accaaatttgctttgtattggtcagagtatccagatatcttgagatgtatgcttgctaaa 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 accaaatttgctttgtattggtcagagtatccagatatcttgagatgtatgcttgctaaa 362
Query: 62 ccgcccagcaaaccaaagcagcaagcagcaactgcttaagcagcaactttggttaaaaag 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccgcccagcaaaccaaagcagcaagcagcaactgcttaagcagcaactttggttaaaaag 302
Query: 122 aaagagaccaagcaagcaa--gcagtttatctgctccctagtccccaggaaccccttcca 179
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaagagaccaagcaagcaatcccagtttatctgctccctagtccccaggaaccccttcca 242
Query: 180 tcttcatcttcagaatactcccccctttctttccttactc 219
||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcttcatcttcagaatactcccccctttctttccttactc 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 219
Length of database: 621
Length adjustment: 9
Effective length of query: 210
Effective length of database: 612
Effective search space: 128520
Effective search space used: 128520
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no118_k18.g1 MSMg01no118_k18.g1 CHROMAT_FILE:
MSMg01no118_k18.g1 PHD_FILE: MSMg01no118_k18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:25:36 2005
(286 letters)
>mm_chr3_120811705_120812391
Length = 687
Score = 476 bits (246), Expect = e-139
Identities = 276/286 (96%), Gaps = 1/286 (0%)
Strand = Plus / Plus
Query: 2 tactgcacataaagactttgtgagaacattaaatgaagtggggtacctcggtgagttctt 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 tactgcacataaagactttgtgagaacattaaatgaagtggggtacctcggtgagttctt 261
Query: 62 caatttcctaaacgtacaatgaccgaagaggaggggtactaggagacagatgggatgcaa 121
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 caatttcctaaatgtacaatgaccgaagaggaggggtactaggagacagatgggatgcaa 321
Query: 122 cgtgccc-agcaagatcctggaagactctaatgaaatgctattcaataatacaaagccta 180
||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 322 cgtgccccagcaagatcctggaagactctgatgaaatgctattcaataatccaaagccta 381
Query: 181 tacgactataaaattaacacagttcaaacacccagggctgaaatctcagaagtatgttcg 240
||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 382 tacgactataaaattaacacaattcaaacacccagggctgaaatctcagaagtatgctcg 441
Query: 241 atagaatcgtttatggtcaacctgtaaaataaaagcaagttactga 286
|||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 442 atagaaacgcagatggtcaacctgtaaaataaaagcaagttactga 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 687
Length adjustment: 9
Effective length of query: 277
Effective length of database: 678
Effective search space: 187806
Effective search space used: 187806
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
