Query= MSMg01no118_o04.b1 MSMg01no118_o04.b1 CHROMAT_FILE:
MSMg01no118_o04.b1 PHD_FILE: MSMg01no118_o04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:25:52 2005
(328 letters)
>mm_chr3_101292609_101293336
Length = 728
Score = 605 bits (313), Expect = e-177
Identities = 319/321 (99%)
Strand = Plus / Plus
Query: 5 gaattcctccctctctgcctcttgattgtgggtgtagcgtaaccagctggcctctcgctc 64
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctccctctctgcttcttgattgtgggtgtagcgtaaccagctggcctctcgctc 264
Query: 65 ctgctgccatctcagccaccaagatggactgtatccctctgaactgtgagtgaaactaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctgctgccatctcagccaccaagatggactgtatccctctgaactgtgagtgaaactaaa 324
Query: 125 ctcttcctcccttaagttgtcttggtcaggcatttgatcgcagcagtgagagaagtgtct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctcttcctcccttaagttgtcttggtcaggcatttgatcgcagcagtgagagaagtgtct 384
Query: 185 aatacagtgggtgagagaagtgtctaatacagtgggcatctccctgcagttcccaacaag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aatacagtgggtgagagaagtgtctaatacagtgggcatctccctgcagttcccaacaag 444
Query: 245 gcctgctctgctctgtggctgtgggctcatttccttcttggtccctaatatttaaagatg 304
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gcctgctctgctctgtggccgtgggctcatttccttcttggtccctaatatttaaagatg 504
Query: 305 tgtgttcttcaaatatatcct 325
|||||||||||||||||||||
Sbjct: 505 tgtgttcttcaaatatatcct 525
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 328
Length of database: 728
Length adjustment: 9
Effective length of query: 319
Effective length of database: 719
Effective search space: 229361
Effective search space used: 229361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no118_o04.g1 MSMg01no118_o04.g1 CHROMAT_FILE:
MSMg01no118_o04.g1 PHD_FILE: MSMg01no118_o04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:25:52 2005
(379 letters)
>mm_chr3_101381626_101382407
Length = 782
Score = 673 bits (348), Expect = 0.0
Identities = 373/382 (97%), Gaps = 3/382 (0%)
Strand = Plus / Minus
Query: 1 cacctggccctggcattgctcagactcatctggaccatctctcttcctggcctcttgcca 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 cacctggccctgtcattgctcagactcatctggaccatctctcttcctggcctcttgcca 523
Query: 61 acacttccatacactgatctcatcttagaattaaaacactttggcctcatcaagtgcaaa 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 522 acacttccatacactgatctcatcttagaattaaaacactttggcctcatcaagtgcaga 463
Query: 121 gtctatggtgcaaggtggggcaggcctccaggatgtgtctcacagcctgtccaaggccat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 gtctatggtgcaaggtggggcaggcctccaggatgtgtctcacagcctgtccaaggccat 403
Query: 181 agtaggtcagttcactgttgcc--ctctctttccctacatctttggtaaggatggtccca 238
|||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||
Sbjct: 402 agtaggtcagttcactgttgccctctctctttccctacatctctggtaaggatggtccca 343
Query: 239 cccaacccatcaatcctgatagtccctttgggctgaagtcattgcagcatctctgttggg 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 cccaacccatcaatcctgatagtccctttgggctgaagtcattgcagcatctctgttggg 283
Query: 299 gttgctatttctgctcttctgataataatctttaaggc-ttttttggccactgtgagagg 357
|||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||
Sbjct: 282 gttgctatttctgctcttctgataataatctttatggctttttttggtcactgtgagagg 223
Query: 358 ttccatagtacccttcatagat 379
|||||||||||||| |||||||
Sbjct: 222 ttccatagtaccctgcatagat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 379
Length of database: 782
Length adjustment: 9
Effective length of query: 370
Effective length of database: 773
Effective search space: 286010
Effective search space used: 286010
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
