Query= MSMg01no119_l13.b1 MSMg01no119_l13.b1 CHROMAT_FILE:
MSMg01no119_l13.b1 PHD_FILE: MSMg01no119_l13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:57 2005
(248 letters)
>mm_chr3_153603378_153604025
Length = 648
Score = 456 bits (236), Expect = e-133
Identities = 245/248 (98%)
Strand = Plus / Minus
Query: 1 ttccgagaatctgacaagcctcggagtgccagagggtgaggcagatagaggagtttggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ttccgagaatctgacaagcctcggagtgccagagggtgaggcagatagaggagtttggga 246
Query: 61 gggagtttgtgagctcagactaaagtgcaggtaatgagaggactggtggaggagtgcacc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 245 gggagtttgtgagctcagactaaagtgcaggtaatgagaggactggtggaggagcgcacc 186
Query: 121 tttgaccccagcacttgagaccgaggcaggtggatctcttgagttcgagggcaggctgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 tttgaccccagcacttgagaccgaggcaggtggatctcttgagttcgagggcaggctgat 126
Query: 181 ctacagagctagttcctggtcagccaggactaactggttctgatggataaagtaggcata 240
||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||
Sbjct: 125 ctacagagctagttcctggccagccaggactaactggttctgatggataaagtaggtata 66
Query: 241 acaagtgc 248
||||||||
Sbjct: 65 acaagtgc 58
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no119_l13.g1 MSMg01no119_l13.g1 CHROMAT_FILE:
MSMg01no119_l13.g1 PHD_FILE: MSMg01no119_l13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:57 2005
(337 letters)
>mm_chr3_153468826_153469563
Length = 738
Score = 646 bits (334), Expect = 0.0
Identities = 337/338 (99%), Gaps = 1/338 (0%)
Strand = Plus / Plus
Query: 1 aattcccagaactcaggtaaaaatggacagcgcagtggagcatgtctgtaatttggccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aattcccagaactcaggtaaaaatggacagcgcagtggagcatgtctgtaatttggccct 260
Query: 61 tctaccacaagataaaacacggagacacggagacacggcgagttgcctgaaacttgaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctaccacaagataaaacacggagacacggagacacggcgagttgcctgaaacttgaagg 320
Query: 121 tcaagtaggctggagtatggtgcacagcatcaaagaaagaccccacctcaaacaaggtag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcaagtaggctggagtatggtgcacagcatcaaagaaagaccccacctcaaacaaggtag 380
Query: 181 aag-tgagaactgactcctcaaacctgccctgacccccacatgcattctctgacgtgttg 239
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaggtgagaactgactcctcaaacctgccctgacccccacatgcattctctgacgtgttg 440
Query: 240 tgctgtgcttgcatgcacgtgtgttcacacacatcccacacacattttgcttggttggtt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgctgtgcttgcatgcacgtgtgttcacacacatcccacacacattttgcttggttggtt 500
Query: 300 tttgagggttttttggattgtttttgtttttgttttac 337
||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttgagggttttttggattgtttttgtttttgttttac 538
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 738
Length adjustment: 9
Effective length of query: 328
Effective length of database: 729
Effective search space: 239112
Effective search space used: 239112
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
