Query= MSMg01no120_h03.b1 MSMg01no120_h03.b1 CHROMAT_FILE:
MSMg01no120_h03.b1 PHD_FILE: MSMg01no120_h03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:27:53 2005
(181 letters)
>mm_chr3_75660261_75660842
Length = 582
Score = 302 bits (156), Expect = 1e-86
Identities = 173/180 (96%), Gaps = 5/180 (2%)
Strand = Plus / Plus
Query: 5 gaattcaaggtttc--gcaaaacaaagcatttctgtccattacttatcagtgcctgttcc 62
||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaggt--caaggaaaacaaagcatttctgtccattacttatcagtgcctgttcc 262
Query: 63 tgtggctagggtattagactctagatatctagcagatatttgccaaattaatcatgggaa 122
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tgtggctagagtattagactctagatatctagcagatatttgccaaattaatcatgggaa 322
Query: 123 aattcagtttctatcttctgtcttttttttt-cttttatacttgttctattctatatttg 181
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 323 aattcagtttctatcttctgtcttttttttttcttttatacttgttctattctatatttg 382
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 181
Length of database: 582
Length adjustment: 8
Effective length of query: 173
Effective length of database: 574
Effective search space: 99302
Effective search space used: 99302
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no120_h03.g1 MSMg01no120_h03.g1 CHROMAT_FILE:
MSMg01no120_h03.g1 PHD_FILE: MSMg01no120_h03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:27:53 2005
(244 letters)
>mm_chr3_75824121_75824764
Length = 644
Score = 433 bits (224), Expect = e-126
Identities = 239/244 (97%)
Strand = Plus / Minus
Query: 1 attcttgattctcagctcttgagacatttcaatgagatccctttctcctcatgaaccctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 attcttgattctcagctcttgagacatttcaatgagatccctttctcctcatgaaccctt 385
Query: 61 attttctctgccttttctttcttttgcactgagcacgttgaatctataagccaatattta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 attttctctgccttttctttcttttgcactgagcacgttgaatctataagccaatattta 325
Query: 121 tctaaaaattgaaaactatataataattacccatgcaattattttattttctcagttctt 180
||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 324 tctaaaaatggaaaactatataataattactcatgcaattattttattttctcagttctt 265
Query: 181 ttacatccttttgctacttgatttacctggataaatgacttaccaaaatgatctaaaact 240
||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 264 ttacatctttttgctacttgatttacctggataaatgacttagtaaaatgatctaaaact 205
Query: 241 taag 244
||||
Sbjct: 204 taag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
