Query= MSMg01no125_b07.b1 MSMg01no125_b07.b1 CHROMAT_FILE:
MSMg01no125_b07.b1 PHD_FILE: MSMg01no125_b07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:37:00 2005
(365 letters)
>mm_chr3_30376259_30377023
Length = 765
Score = 609 bits (315), Expect = e-179
Identities = 345/365 (94%), Gaps = 16/365 (4%)
Strand = Plus / Minus
Query: 1 tgagtaagtttcgatctactcaactttcaaatggagaagttaggctagagcttagggaag 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 439 tgagtaagtttcgatctactcaactttcaaatggagaagttaggctagagtttagggaag 380
Query: 61 atctctctgcacacagtactctgtgatccaaagctcaccgcttcagagcttgagtcatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 atctctctgcacacagtactctgtgatccaaagctcaccgcttcagagcttgagtcatcc 320
Query: 121 cacctgcaaaacgtatctttaaatagaatttgtgctcagagggatgatcggattggtgga 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 cacctgcaaaacggatctttaaatagaatttgtgctcagagggatgatcggattggtgga 260
Query: 181 tgctagttggctagtgagggaatggtgtgttttgcgtgaaagataatgtcaccgagtgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 259 tgctagttggctagtgagggaatggtgtgttttgcgtgaaagataatgtcatcgagtgc- 201
Query: 241 attgtcccatattgtaaggaatcccttcattttgacaggttttcataggctttattttga 300
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ---------------aaggaatcccttcattttgacaggttttcataggctttattttga 156
Query: 301 atatatttgaattttcatggcattaaaattattcccaggctgcttctagggaaacgaaaa 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 155 atatatttgaattttcatggcattaaaattattcccaggctgcttctagggaaatgaaaa 96
Query: 361 ggaag 365
|||||
Sbjct: 95 ggaag 91
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 365
Length of database: 765
Length adjustment: 9
Effective length of query: 356
Effective length of database: 756
Effective search space: 269136
Effective search space used: 269136
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no125_b07.g1 MSMg01no125_b07.g1 CHROMAT_FILE:
MSMg01no125_b07.g1 PHD_FILE: MSMg01no125_b07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:37:00 2005
(436 letters)
>mm_chr3_30230851_30231688
Length = 838
Score = 781 bits (404), Expect = 0.0
Identities = 429/438 (97%), Gaps = 2/438 (0%)
Strand = Plus / Plus
Query: 1 tcattttaaatatttagaaaaagataaacagggaaagaccagaaataaatctacaagatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcattttaaatatttagaaaaagataaacagggaaagaccagaaataaatctacaagatg 260
Query: 61 aatacacaaaatttttcactcaaattaatcaaaataaatagatatg--tttaaaaaaaat 118
|||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 261 aatacacaaaatttttcactcaaattaatcaaaataaatagacatgtttttaaaaaaaat 320
Query: 119 cacccaaaatttaaagaacaacaacaaacaatacagggaaaggcttcttcattaaagaat 178
||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 321 cacccaaaatttaaagaacaacaacaaacgatacaggggaaggcttcttcattaaagaat 380
Query: 179 caagatgcagagaaagcttgccagtgcttagcaggaagtgaagaacctgatgtgccaacc 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caagatgcagagaaagcttgccagtgcttagcaggaagtgaagaacctgatgtgccaacc 440
Query: 239 catttgaaaaactagacaaaatgagtaacttcacacaaaaaataaaaaagaataggcttg 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 catttgaaaaactagacaaaatgagtaacttcacacaaaaaataaaaaagaataggcttg 500
Query: 299 aatgcactatttgaaaagttgagcgtgtagctgattctccgagtattctagtgcttggaa 358
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatgcactatttgaaaagttgaccgtgtagctgattctccgagtattctagtgcttggaa 560
Query: 359 caagttctgaacagagccttgtgtgcctgccacaccctccaatagaaaccgcccagagaa 418
||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 561 caagttctgaacagagccttgtgtgactgccacaccctccaacagaaaccgcccagagaa 620
Query: 419 cagctactgcatcacgtg 436
||||||| ||||||||||
Sbjct: 621 cagctacagcatcacgtg 638
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 838
Length adjustment: 9
Effective length of query: 427
Effective length of database: 829
Effective search space: 353983
Effective search space used: 353983
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
