Query= MSMg01no125_c11.b1 MSMg01no125_c11.b1 CHROMAT_FILE:
MSMg01no125_c11.b1 PHD_FILE: MSMg01no125_c11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:37:06 2005
(315 letters)
>mm_chr3_84820295_84821008
Length = 714
Score = 580 bits (300), Expect = e-170
Identities = 309/312 (99%), Gaps = 1/312 (0%)
Strand = Plus / Minus
Query: 4 ggaattcctctagtcagagtactgaaaagagggtgtttgttctcctccgagtgtgtaaat 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 ggaattcctctagtcagagtactgaaaagagggtgtttgttctcctccgagtgtgtaaat 455
Query: 64 gaaggcaggtacacaccaaccaacacaaacgtgcacacacatgtacatgtgagagtgacg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 gaaggcaggtacacaccaaccaacacaaacgtgcacacacatgtacatgtgagagtgacg 395
Query: 124 tgtatgtattttctctgcttgtacctgggccctgtttctaaatgctctactttcaaaaaa 183
|| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 394 tgcatgtattttctctgcttgtacctgggccctgtttctaaatgctctactttc-aaaaa 336
Query: 184 attcaggtagacagcaccagaaagtgggaagaagtctctcttccgcaccctttctgttgg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 attcaggtagacagcaccagaaagtgggaagaagtctctcttccgcaccctttctgttgg 276
Query: 244 ctagtccccaccccccatgtttgcaaaggaagttatatatcttgaaaaaaaattaaagtg 303
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 275 ctagtccccaccccccatgtttgcaaaggaagttatagatcttgaaaaaaaattaaagtg 216
Query: 304 tgcagagggact 315
||||||||||||
Sbjct: 215 tgcagagggact 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 714
Length adjustment: 9
Effective length of query: 306
Effective length of database: 705
Effective search space: 215730
Effective search space used: 215730
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no125_c11.g1 MSMg01no125_c11.g1 CHROMAT_FILE:
MSMg01no125_c11.g1 PHD_FILE: MSMg01no125_c11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:37:06 2005
(152 letters)
>mm_chr3_84722985_84723536
Length = 552
Score = 294 bits (152), Expect = 2e-84
Identities = 152/152 (100%)
Strand = Plus / Plus
Query: 1 tgattgaaatacctgtaattacaatgacatttttgccatagttgacttaaaggtatagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgattgaaatacctgtaattacaatgacatttttgccatagttgacttaaaggtatagct 260
Query: 61 atattaatcaccagctgaattcttggtgagcagctgtgtaaggccagtttaacagctggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atattaatcaccagctgaattcttggtgagcagctgtgtaaggccagtttaacagctggg 320
Query: 121 gtatcccggcataagcatgagagttaaactta 152
||||||||||||||||||||||||||||||||
Sbjct: 321 gtatcccggcataagcatgagagttaaactta 352
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 152
Length of database: 552
Length adjustment: 8
Effective length of query: 144
Effective length of database: 544
Effective search space: 78336
Effective search space used: 78336
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
