NTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGCGCG
GAATTCTCATCATTCTCTCTTATTTCAGATCAATATTTTTATAGTGGCAA
AACAGTGATTTACCATTTTTAAGGATATATTGTATATTTCTCAACTGTAA
TTCTATTTGTAGTGGCCAGCTCCATCTAGGAGTCCAATATTTCTTTATTG
GGTCTGATCTCTTTTGCTCTATTTCATATAAGGAGTCAAGACATTAGAAA
TCTGACAAAATTTTAAGTATAGATTCTTCAAATTGTGTTGTTCAGAGCTA
TATAACTATATTGATTTTTTCAATTTAGTTTTTTTGAGAATTTTGTTCTG
TGGATTTGGACTACATTTACATTTTCTGCCAACACTTCAGAGATCCAACA
CTCTTTTCTACTCAATAAATACATTGTAGTGCATCAGCATGTGAAATATC
TCTGTCTCTGTCTCTCTCTTTCTCATGCACACGTGCGCACACACACACAC
ACACACACACACACACTCACATACACACACACACACACACGTATTTTTAT
TTTCTTTTAAACTATCAAGTCTTATTTTCACTGTTCATATATTGAGGAAT
GCGTGATCTTTCACTTTACTTCAGGATGGTCAATATGTCAAGATCCTTAT
TATTCATTTTTATGTAAGGCGTTATAGCAAATCCACCCAGTCAATTGCTA
CTTTACATGTAATATGCGTAACA

AATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACTGAATGGCAGAGAA
GCACCTGGAAAAATGTTCAACATCTTTAATCATCAGGGAAATGCAAATCA
AAACAACACTGAGATTCCACCTCACACCAGTCATAATGGCTAAGATGGAA
AATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACT
CCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAG
TCTGGTGGTTCCTTAGAAAATTAGACATAGTACTACCAGAGAATCCAGCA
ATAGCTCTCCTGGGCATATATCCAGAAGATGTCCCAACCGGTAAGAAGGA
CACATGCTCTACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGTG
GAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGT
ACATTTACACAATGGAGTACTACTCGGCTATTAAAAAGAATGAATTTATG
AAATTCCTAGGCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGT
GACACAATCACAAAGGAACTCACACAATATGTACTCACTGATAAGTGGAT
ATTAGCCCATAACTTAGGATACCCCAGATATAAGATACCATTTGCTAAAC
ACTTGAAACTCCAGAAGAATG

Query= MSMg01no125_l09.b1 MSMg01no125_l09.b1 CHROMAT_FILE:
MSMg01no125_l09.b1 PHD_FILE: MSMg01no125_l09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:37:50 2005
         (450 letters)



>mm_chr3_76648427_76649276
          Length = 850

 Score =  801 bits (414), Expect = 0.0
 Identities = 432/438 (98%)
 Strand = Plus / Plus

                                                                       
Query: 4   gaattctcatcattctctcttatttcagatcaatatttttatagtggcaaaacagtgatt 63
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattctcatcattctgtcttatttcagatcaatatttttatagtggcaaaacagtgatt 263

                                                                       
Query: 64  taccatttttaaggatatattgtatatttctcaactgtaattctatttgtagtggccagc 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 taccatttttaaggatatattgtatatttctcaactgtaattctatttgtagtggccagc 323

                                                                       
Query: 124 tccatctaggagtccaatatttctttattgggtctgatctcttttgctctatttcatata 183
           ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||
Sbjct: 324 tccatctaggagtccaatatttctttattgtttctgatctcttttgctctatttcatata 383

                                                                       
Query: 184 aggagtcaagacattagaaatctgacaaaattttaagtatagattcttcaaattgtgttg 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aggagtcaagacattagaaatctgacaaaattttaagtatagattcttcaaattgtgttg 443

                                                                       
Query: 244 ttcagagctatataactatattgattttttcaatttagtttttttgagaattttgttctg 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttcagagctatataactatattgattttttcaatttagtttttttgagaattttgttctg 503

                                                                       
Query: 304 tggatttggactacatttacattttctgccaacacttcagagatccaacactcttttcta 363
            |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cggatttggactacattcacattttctgccaacacttcagagatccaacactcttttcta 563

                                                                       
Query: 364 ctcaataaatacattgtagtgcatcagcatgtgaaatatctctgtctctgtctctctctt 423
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 564 ctcaataaatacattgtagtgcatcagtatgtgaaatatctctgtctctgtctctctctt 623

                             
Query: 424 tctcatgcacacgtgcgc 441
           ||||||||||||||||||
Sbjct: 624 tctcatgcacacgtgcgc 641


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 850
Length adjustment: 10
Effective length of query: 440
Effective length of database: 840
Effective search space:   369600
Effective search space used:   369600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)