Query= MSMg01no126_d16.b1 MSMg01no126_d16.b1 CHROMAT_FILE:
MSMg01no126_d16.b1 PHD_FILE: MSMg01no126_d16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:38:31 2005
(109 letters)
>mm_chr3_13918210_13918719
Length = 510
Score = 205 bits (106), Expect = 6e-58
Identities = 109/110 (99%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 1 taaatagaaaagaaaccacctaataggttctgaaaa-taatctgaataaatattcccagg 59
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 201 taaatagaaaagaaaccacctaataggttctgaaaaataatctgaataaatattcccagg 260
Query: 60 agcaagaaggtacatattcaaatatgtttgatcttatcaattggcatgtt 109
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agcaagaaggtacatattcaaatatgtttgatcttatcaattggcatgtt 310
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 109
Length of database: 510
Length adjustment: 8
Effective length of query: 101
Effective length of database: 502
Effective search space: 50702
Effective search space used: 50702
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
| Query= MSMg01no126_d16.g1 MSMg01no126_d16.g1 CHROMAT_FILE:
MSMg01no126_d16.g1 PHD_FILE: MSMg01no126_d16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:38:31 2005
(335 letters)
>mm_chr3_14072472_14073206
Length = 735
Score = 603 bits (312), Expect = e-177
Identities = 330/336 (98%), Gaps = 2/336 (0%)
Strand = Plus / Minus
Query: 1 atgagtagctgtaggtgagtttgctgtgaagtgctgaaagttggaatttgtcttaacttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 atgagtagctgtaggtgagtttgctgtgaagtgctgaaagttggaatttgtcttaacttt 364
Query: 61 cttgaaa-aacacaaaacaaaatagtcttgtgattccacacttaccacctagaacctcat 119
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 cttgaaacaacacaaaacaaaatagtcttgtgattccacacttaccacctagaacctcat 304
Query: 120 agctaggagataaccattttggaagaaaaagtctccttagggggggaaaaaagctttttt 179
||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 303 agctaggagataaatattttggaagaaaaagtctccttaggggggggaaaaagc-ttttt 245
Query: 180 ttttgatacatagcatgggataagacacacattgacttactctctgtagcagaattttcc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 ttttgatacatagcatgggataagacacacattgacttactctctgtagcagaattttcc 185
Query: 240 tccaatctatttaaatattaatacaagaagaagcctgtgatggggcagtggaaaaggaag 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 tccaatctatttaaatattaatacaagaagaagcctgtgatggggcagtggaaaaggaag 125
Query: 300 gcaggtggagatacttagagatagtagagagagtac 335
|||||||||||||||||||||||| |||||||||||
Sbjct: 124 gcaggtggagatacttagagatagcagagagagtac 89
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 335
Length of database: 735
Length adjustment: 9
Effective length of query: 326
Effective length of database: 726
Effective search space: 236676
Effective search space used: 236676
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
