XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CATCAATAATTACTTTTGTATACATTTAAGACATTACTGTGCTGTCCTTA
CTGTGATGTGAGATAGGAGTATAAGAAATCTCATTTTAGTAGTTATTTCA
TGGTGTCAGTGACCACAAATGTGTCACTTAAAAAACAGAAGGAACTTGCT
TGTGAATGCAGGCTGGTAGACATGTGTGATATGGGTAAGTCAGAACCTGT
CAGGGTGTGCCGTTTGTGATGAGGACAGGTGAACACTTTTATTATTTATG
TGTATGGGTGGTTTTCCTTCATGTATGTTTATGTACCATGTGAATGCCTG
GAGGATGATGAGGGCATAGAAACCCTTGGAACTAGAGTCACAGACAGTTG
TGAATCTCATGTGGCCGCTAGGGATTGAACTCACATCCTCTGGAAGAGCA
GTCAATGCTTTGAACTGCTGAGCCATCTCTCCAATCCCAGGGAGATTCTC
AACAAAGTTCTCAGAAAATAAGTCTAATCTTCTCTTTTCCAGTAGCTGAA
TCTCTGAAAAGATATTGCATCTGAGATAAGCTAGCAAAAATACTTATTAT
CTATGTCAACCACAGCTATGCTGTACTCTTAGGGGACTACAGATAGTACT
GCCCACTAGTTAATGCTCTGCTACCTGTTTAATTTTTATTTTATTTATGC
GGAA

ATGTAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTCACCTGAGAAATACCGAATGGCTGAGA
AGCACCTGAAAAAATGTTCAGCATCCTTAATCATCAGAGAAATGCAAATC
AAAACAACCCTGAGATTCCATCTCACACCAGTCAGAATGGCTAAGATAAA
AAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAAAAAGAGGAACAC
TCCTTAATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGCAAATCA
GTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCCTGC
AATACCTCTCCTGGGCATATATCCAGAAGATGTCCCAACTGGTAAGAAGA
ACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGC
TGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAAAAAAAAAT
GTGGTACATTTACACAATGGAATACTACTCAGCTATTAAAAAGAATGAAT
TTATGAAATTCCTAGGCAAATGGATGGACCCTGGAAGGGCTTCATCCCTG
AGGGAGGGACCCAATCCCCAAAAGAAATCCAAAGGAAAAGGTCCCCCCCC
CGGTGAATAAGGGGGATATTTTTCCCCCACAATTTTTTATTTTATCCCGG
GAAAAAATTG

Query= MSMg01no126_f05.b1 MSMg01no126_f05.b1 CHROMAT_FILE:
MSMg01no126_f05.b1 PHD_FILE: MSMg01no126_f05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:38:40 2005
         (536 letters)



>mm_chr3_82746660_82747595
          Length = 936

 Score =  841 bits (435), Expect = 0.0
 Identities = 441/443 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcatcaataattacttttgtatacatttaagacattactgtgctgtccttactgtg 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gaattcatcaataattacttttgtatacatttaagacattactgtgctgtccttactgtg 384

                                                                       
Query: 65  atgtgagataggagtataagaaatctcattttagtagttatttcatggtgtcagtgacca 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 atgtgagataggagtataagaaatctcattttagtagttatttcatggtgtcagtgacca 324

                                                                       
Query: 125 caaatgtgtcacttaaaaaacagaaggaacttgcttgtgaatgcaggctggtagacatgt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 caaatgtgtcacttaaaaaacagaaggaacttgcttgtgaatgcaggctggtagacatgt 264

                                                                       
Query: 185 gtgatatgggtaagtcagaacctgtcagggtgtgccgtttgtgatgaggacaggtgaaca 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gtgatatgggtaagtcagaacctgtcagggtgtgccgtttgtgatgaggacaggtgaaca 204

                                                                       
Query: 245 cttttattatttatgtgtatgggtggttttccttcatgtatgtttatgtaccatgtgaat 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 cttttattatttatgtgtatgggtggttttccttcatgtatgtttatgtaccatgtgaat 144

                                                                       
Query: 305 gcctggaggatgatgagggcatagaaacccttggaactagagtcacagacagttgtgaat 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 gcctggaggatgatgagggcatagaaacccttggaactagagtcacagacagttgtgaat 84

                                                                       
Query: 365 ctcatgtggccgctagggattgaactcacatcctctggaagagcagtcaatgctttgaac 424
           |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83  ctcatgtgggtgctagggattgaactcacatcctctggaagagcagtcaatgctttgaac 24

                                  
Query: 425 tgctgagccatctctccaatccc 447
           |||||||||||||||||||||||
Sbjct: 23  tgctgagccatctctccaatccc 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 936
Length adjustment: 10
Effective length of query: 526
Effective length of database: 926
Effective search space:   487076
Effective search space used:   487076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)