Query= MSMg01no128_p07.b1 MSMg01no128_p07.b1 CHROMAT_FILE:
MSMg01no128_p07.b1 PHD_FILE: MSMg01no128_p07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:42:13 2005
(357 letters)
>mm_chr3_62821862_62822622
Length = 761
Score = 584 bits (302), Expect = e-171
Identities = 334/346 (96%), Gaps = 4/346 (1%)
Strand = Plus / Minus
Query: 5 gaattcacttctgttccggacctttgaagaaggaaaacatacacctttgatctggatcaa 64
||||||||||||| || |||||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 346 gaattcacttctggtctggacctttgaagtaggaaaacatacacctttgctctggatcaa 287
Query: 65 agactatgataagaaagctaggatcagcagaacagatgatccccctacccatccaccc-- 122
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 286 agactatgataagaaagctaggatcagcagaacagatgatccccctacacatccaccctg 227
Query: 123 ct--ccccccccccaaataacacaacaaaggatgccgtccctggaactgaaaatctagca 180
|| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 226 ctccccccccccccaaataacacagcaaaggatgccgtccctggaactgaaaatctagca 167
Query: 181 aacttctcagtgccagtgacatcatggatactggagaactcacaaccaccattttgctaa 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 166 aacttctcagtgccagtgacatcatggatactggagaactcacaaccatcattttgctaa 107
Query: 241 accagcataatgtctaactacaacgtagaaacatttgtccttatacacacagatcagtgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 accagcataatgtctaactacaacgtagaaacatttgtccttatacacacagatcagtgt 47
Query: 301 agtctttaccccttgtctttgttggagttatgatttctgagatgat 346
|||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 46 agtctttaccccttgtctttgttggagttatgatatctgagatgat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 357
Length of database: 761
Length adjustment: 9
Effective length of query: 348
Effective length of database: 752
Effective search space: 261696
Effective search space used: 261696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no128_p07.g1 MSMg01no128_p07.g1 CHROMAT_FILE:
MSMg01no128_p07.g1 PHD_FILE: MSMg01no128_p07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:42:13 2005
(286 letters)
>mm_chr3_62664642_62665327
Length = 686
Score = 530 bits (274), Expect = e-155
Identities = 283/286 (98%)
Strand = Plus / Plus
Query: 1 atagcagccagatggtggatgctgccgcctggtggctcttagggaaggccaaacggagaa 60
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 atagcagccagatggtggatgctgccgcctggtggctcttagggaaggaaaaacggagaa 260
Query: 61 gtaaaaatgctgcaggggagagcagtaggagctgcgggggagttactgatcctcacctgg 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 261 gtaaaaatgctgcaggggagagcagtaggagctgcaggggagttactgatcctcacctgg 320
Query: 121 acctgcagaatcagaagagagcatggtagatcttagagatccaggagaacactcatgaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acctgcagaatcagaagagagcatggtagatcttagagatccaggagaacactcatgaag 380
Query: 181 gctctgcaatctccccaccggcacctcaaggaaaacctaagcatctaggacataagtttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctctgcaatctccccaccggcacctcaaggaaaacctaagcatctaggacataagtttc 440
Query: 241 tgcttgcccctcctacacacagtagcactaggaacctgctagagcc 286
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgcttgcccctcctacacacagtagcactaggaacctgctagagcc 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
