Query= MSMg01no131_e10.b1 MSMg01no131_e10.b1 CHROMAT_FILE:
MSMg01no131_e10.b1 PHD_FILE: MSMg01no131_e10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:26 2005
(580 letters)
>mm_chr3_141065311_141066293
Length = 983
Score = 984 bits (509), Expect = 0.0
Identities = 566/587 (96%), Gaps = 7/587 (1%)
Strand = Plus / Plus
Query: 1 ggatgagcagagagat----aaaaaaaaaaaaaaccaaagacattgaatggctaaacgat 56
|||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 197 ggatgaacagagagataaaaaaaaaaaaaaaaaaacaaagacattgaatggctaaacgat 256
Query: 57 gaggaatacaggcaagtcacacatattaactgataatagttgggagcatgtagaaactct 116
||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||
Sbjct: 257 gaggaatacaggcaagtcacacatactaaatgataatagttgggagcatgcagaaactct 316
Query: 117 gctcagtctcaggcc-tccccccc-ccc-aaaaaataatccaacatgaaggagggagggg 173
||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 317 gctcagtctcaggccttccccccctcccaaaaaaataatccaacatgaaggagggagggg 376
Query: 174 aacacagagttcgaccctagtgaagcacctgctgcaatgaacagctgctgaaagaggaga 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 aacacagagttcgaccctagtgaagcacctgctgcaatgaacagctgctgaaagaggaga 436
Query: 234 gttaacttttctccctaggatgtagaccacgctccacagaacacctcctatgactatatg 293
||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 437 gttaacttttctccctaggatgtagaccatgctccacagaacatctcctatgactatatg 496
Query: 294 agcaggacaacctctacttgatggattggtcttacaaaatttaaaaaggacaagaagtag 353
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 agcaggacaacctctacttgatggattggtcttacaaaatttaaaaaggacaagaagtaa 556
Query: 354 gatagtctgagacggatctgggaggagtcaaaggagtgtgtgtgtgatatcaatgtattg 413
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 gatagtctgagatggatctgggaggagtcaaaggagtgtgtgtgtgatatcaatgtattg 616
Query: 414 tattttatgaaattctcaaagaattatgaaccatgagggaagacgaagtaaaatgagagg 473
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 617 tattttatgaaattctcaaagaattatgaacgatgagggaagacgaagtaaaatgagagg 676
Query: 474 acaactgtttctttgatgaaagaaggtcatggtatgagcagttctagaagctgtaccctt 533
||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||
Sbjct: 677 acaactgtttctttgatgaaagaaggtcacggtatgagcagttctagaagctgtatcctc 736
Query: 534 gagcatgtacccaaggtacaaaagtattacactttctactttatttt 580
|||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 737 gagcatgtacccaaggtacaaaagtactacactttctactttatttt 783
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 983
Length adjustment: 10
Effective length of query: 570
Effective length of database: 973
Effective search space: 554610
Effective search space used: 554610
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no131_e10.g1 MSMg01no131_e10.g1 CHROMAT_FILE:
MSMg01no131_e10.g1 PHD_FILE: MSMg01no131_e10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:26 2005
(283 letters)
>mm_chr3_141215960_141216641
Length = 682
Score = 509 bits (263), Expect = e-148
Identities = 278/283 (98%), Gaps = 1/283 (0%)
Strand = Plus / Minus
Query: 1 aaagtttcgaaggcccatgaagttatcagaaaacactcgctccagagctgatattgtctg 60
|||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 482 aaagtttcgaaggcccatgaaggtatcagaaaacactggctccagagctgatattgtctg 423
Query: 61 ttttggttcaataataattacgtgcatgtaattgaatgagaatctatcatacccataaat 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 422 ttttggttcaataataattacgtgcatgtaattgaatgagaatctatcagacccataaat 363
Query: 121 cacattgtaaatggacaaaatgcaataaatgtatacaaatagactgtaattacaagctag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 cacattgtaaatggacaaaatgcaataaatgtatacaaatagactgtaattacaagctag 303
Query: 181 ttcaataaaatggatttgataaacttccttataagttataaatattctaacaacccaatg 240
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 302 ttcaataaaatggatttgataaacttccttataagttataaatattctaa-aacccaatg 244
Query: 241 actgactttgcccacggtttcactgaggataatatcgttagag 283
||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 243 actgactttgcccacagtttcactgaggataatatcgttagag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 682
Length adjustment: 9
Effective length of query: 274
Effective length of database: 673
Effective search space: 184402
Effective search space used: 184402
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
