CCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCTGATTTCCTTCCTCCACCTTCTGAGTGTGAGGGTCGATGTGTACT
TGGCACTGGGGAGCCAGACCCAGGGTTTTGCATATGCTACTCAAGTATTC
TACAAACTGAGGCCTGTGTACAGCCCCCTACATGTTTTTAATAATTCTAT
GAGCATGATTTTTCCTATTTATCATCAAATAAGCAGGTTTGGAAATATTC
TGTTTTCTCTCGTGCACTCGCTACTGTGTATCTCAGCCACACCAAGATTC
TGTTATTATAAACAGTAATTAAAAATGCTCTCTTTCTACTGTTATATAAG
CACATACATACATATTTATATGTATGCATGTTCAAGAACTGTGAAAGACA
TCCTGTATCATTTTAATTGATGCAAATAAAAATAAAATGATATATTTTAT
TAATCAAACATGAGATTCTTAGAAAATAATATCTAGAATGTTTTGTAAAT
ACAGAAAACAACCTTTCATGTTAAAGTGAGTCATGAATTATATTAGGGTT
TGCACAATTATTATGGTTACACAGGATTATTTTCAGAAGACAATTTTGCA
ACTCAGGTTATGAGGGTTAAAAGTGTATCTCTGATGACACATAGATTCCA
ATCAGATGTAGACTGATGTGTGCCAAAGAGCGATGAATAAGGTTGGTATG
A

CACGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTACACTAGAAGTGCTTGTTGACTTT
TATATAATAAATTAATTCCTAACTGAATTTTGATGCTGAAGGATGCAGAA
CATCTTCGGTCTTTTATAGGGCTGATGGATGTTTCAATTTTCTAATTGTC
ATGCTGGGAACTTACTTTATGTAAATATGTGGTACAATGGCACACATGTG
TTTAGTGCCATTTCATAAATAGCTGGAAATTATTTCTCAATCCTATGCCC
AAATTCATTTAATAATTTTGTATGATTTTCAACTCAACAATCCAAACAAC
AATTTTTTAAATTTAAATTCCATCACAGTTCTATACAAAAATATGTTAAT
TGGACACTTATGTGCTCAGGACGAATGTTGGTGGTAAACTAATAAAAGTC
CTGTTTTTCTGAACTAAACCATATGTCTCTCCAAAACAGAAACTCTTTTT
GAGTGTGATAAACTCTCTGTCATCTTGAATCTGCTGTATGTGTTGCACCA
GTGTTCATTGTACACCTTGTTTGACCCCAACTCAGAGCATGCTGTACACT
CTCTGTGTTCATAATTGAGGCTATATAAACATCTTCAATGCAACGAAAGA
GAATCCAGAGAAATGCCCCGACTCCCAACAACTGATCCTTGATTCTTCTA
AGGAGCATTTTAAGTGATGATTAAAACT

Query= MSMg01no131_i14.b1 MSMg01no131_i14.b1 CHROMAT_FILE:
MSMg01no131_i14.b1 PHD_FILE: MSMg01no131_i14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:48 2005
         (655 letters)



>mm_chr3_156770498_156771556
          Length = 1059

 Score = 1044 bits (540), Expect = 0.0
 Identities = 569/580 (98%), Gaps = 4/580 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcctga-tttccttcctccaccttctgagtgtgagggtcgatgtgtacttggcact 63
           ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 gaattcctgacattccttcctccaccttctgagtgtgagggtcgatgtgtacttggcact 524

                                                                       
Query: 64  ggggagccagacccagggttttgcatatgctactcaagtattctacaaactgaggcctgt 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 ggggagccagacccagggttttgcatatgctactcaagtattctacaaactgaggcctgt 464

                                                                       
Query: 124 gtacag---ccccctacatgtttttaataattctatgagcatgatttttcctatttatca 180
           ||||||   ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 gtacagcccccccccacatgtttttaataattctatgagcatgatttttcctatttatca 404

                                                                       
Query: 181 tcaaataagcaggtttggaaatattctgttttctctcgtgcactcgctactgtgtatctc 240
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 403 tcaaataagcaggtttggaaatattctgttttctctcttgcactcgctactgtgtatctc 344

                                                                       
Query: 241 agccacaccaagattctgttattataaacagtaattaaaaatgctctctttctactgtta 300
           |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 343 agccacaccaagattccgttattataaacagttattaaaaatgctctctttctactgtta 284

                                                                       
Query: 301 tataagcacatacatacatatttatatgtatgcatgttcaagaactgtgaaagacatcct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tataagcacatacatacatatttatatgtatgcatgttcaagaactgtgaaagacatcct 224

                                                                       
Query: 361 gtatcattttaattgatgcaaataaaaataaaatgatatattttattaatcaaacatgag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 gtatcattttaattgatgcaaataaaaataaaatgatatattttattaatcaaacatgag 164

                                                                       
Query: 421 attcttagaaaataatatctagaatgttttgtaaatacagaaaacaacctttcatgttaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 attcttagaaaataatatctagaatgttttgtaaatacagaaaacaacctttcatgttaa 104

                                                                       
Query: 481 agtgagtcatgaattatattagggtttgcacaattattatggttacacaggattattttc 540
           | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 103 aatgagtcatgaattatattagggtttgcacaattattatggttactcaggattattttc 44

                                                   
Query: 541 agaagacaattttgcaactcaggttatgagggttaaaagt 580
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 43  agaagacaattttgcaactcaggttatgagggttaaaagt 4


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1059
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1049
Effective search space:   676605
Effective search space used:   676605
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)