XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
TCTGGTGTACTTTTAGGGTCACTTATATAAACTATCATATCATCTGCAAA
AAGTGATATTTTTATTCCCTCCTTTCCAATTTGTATCCCCTTGATCTCCT
TTTGTTGTCTAATTGCTCTGGGAAGGACTTCAAATACTATGTTGTATAGG
TATGGAGAAAGTAGGCAGCCTTCTCTAGTCCCTGATTTTATTGGGATTGC
TTCCAGCTTCTCACCATGTTGGCTACTGGTTTGCTGTAGATTGCTTTTAT
CATGTTTAGGTACGGAACTTGAATTCCTGATCTTTCCAAGACTTTTATCA
TGAATTTGTTTTGCACCCCCCCCCATGCTTTCTCCACATCTAATAAGATG
ATCATGTGGTTTTTGTCTTTGAGAATTGTTTATATAGTGGATTATGGTGG
TGGATTTCTGTATATTAAACCATCCCTGCATCCCTGGAATGAAACCTACT
TGGTCAGGATGGATGATTGTTTTGATGTGTTCTTGGATTCAGTTAGCGAG
AATTTTATTGAGTATTTTTGCATCGGTATTCATAAGGGAAATTGGTCTGA
AGTTCTCTATCTTTGTTGGGTCTTTCTGTGGTTTAGGTATCACAGTAATT
GTGGCTTCATAGAATGAGTTGGGTAGAGTACCTTCTGCTTCTATTTTGTG
GAN

AATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXCTTTCAATAGCCCTCACAGCACTGCTCAC
TGGGCAATGTCTTTATCTAAAGTGAAGAAGCTGAGGTCTCTGTTTACTGT
GTGCCAAGGCTTTATGGGAATACATGACAGGTGGTTAGGTGCCAATTGCC
AAAAACTCCACAATTTCCCATTCACAATTGGTCTTAAGCAGTTGTTCCAG
AAAGTGCTACTTAACTGGATATTTCCACACACTCCTGGCTGGCTACGTGA
TGTTATTTCTTCATAGCTTTTCTTGCTTAGCCATACTGACATTGCTGTAA
GTTATCATCTGATTCTTCACATTTACAATCATTGCAGCCTGCTGTGAAAT
CTAAAATATGTAGTGTCTGTAGTCTTCAGAAAGCTAATGTCAAGGATTAA
ACTTGCCCATTGCTGGGGTTCTTTCTAAATGAGGATATTGAATTTGAGTT
AGAAAGGAAGACATTTTACATTCTATTTGAATATTCTTTCAGTATTGTAG
TCTAAGTGAACTTAGTCTCTGAGAATTTTAGACCTGTAGACAATAAAATA
TGGAGTATATTGACTTCCTCTTTTGCATACATCCCCTCTTAATTTCGTGT
CATTTTTTTAAAATAAACTGCTAAGTCTGATTAATG

Query= MSMg01no132_d16.g1 MSMg01no132_d16.g1 CHROMAT_FILE:
MSMg01no132_d16.g1 PHD_FILE: MSMg01no132_d16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:41 2005
         (578 letters)



>mm_chr3_62780397_62781374
          Length = 978

 Score = 1089 bits (563), Expect = 0.0
 Identities = 575/579 (99%), Gaps = 2/579 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctttcaatagccctcacagcactgctcactgggcaatgtctttatctaaagtgaagaagc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 ctttcaatagccctcacagcactgctcactgggcaatgtctttatctaaagtgaagaagc 719

                                                                       
Query: 61  tgaggtctctgtttactgtgtgccaaggctttatgggaatacatgacaggtggttaggtg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 tgaggtctctgtttactgtgtgccaaggctttatgggaatacatgacaggtggttaggtg 659

                                                                       
Query: 121 ccaattgccaaaaactccacaatttcccattcacaattggtcttaagcagttgttccaga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 ccaattgccaaaaactccacaatttcccattcacaattggtcttaagcagttgttccaga 599

                                                                       
Query: 181 aagtgctacttaactggatatttccacacactcctggctggctacgtgatgttatttctt 240
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 598 aagtgctacttaactggatatttccacacactcctggctgtctacgtgatgttatttctt 539

                                                                       
Query: 241 catagcttttcttgcttagccatactgacattgctgtaagttatcatctgattcttcaca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 catagcttttcttgcttagccatactgacattgctgtaagttatcatctgattcttcaca 479

                                                                       
Query: 301 tttacaatcattgcagcctgctgtgaaatctaaaatatgtagtgtctgtagtcttcagaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 tttacaatcattgcagcctgctgtgaaatctaaaatatgtagtgtctgtagtcttcagaa 419

                                                                       
Query: 361 agctaatgtcaaggattaaacttgcccattgctggggttctttctaaatgaggatattga 420
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 418 agctaatgtcaaggattaaacttgcccattgctggggttctttctaaatgaggagattga 359

                                                                       
Query: 421 atttgagttagaaaggaagacattttacattctatttgaatattctttcagtattgtagt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 atttgagttagaaaggaagacattttacattctatttgaatattctttcagtattgtagt 299

                                                                       
Query: 481 ctaagtgaacttagtctctgagaattttagacctgtagacaataaaatatggagtatatt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 ctaagtgaacttagtctctgagaattttagacctgtagacaataaaatatggagtatatt 239

                                                  
Query: 541 gacttcctcttttgc-atacatcccctcttaatttcgtg 578
           |||||||||||| || |||||||||||||||||||||||
Sbjct: 238 gacttcctcttt-gccatacatcccctcttaatttcgtg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 578
Length of database: 978
Length adjustment: 10
Effective length of query: 568
Effective length of database: 968
Effective search space:   549824
Effective search space used:   549824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)