Query= MSMg01no132_h03.b1 MSMg01no132_h03.b1 CHROMAT_FILE:
MSMg01no132_h03.b1 PHD_FILE: MSMg01no132_h03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:58 2005
(494 letters)
>mm_chr3_130760533_130761426
Length = 894
Score = 948 bits (490), Expect = 0.0
Identities = 493/494 (99%)
Strand = Plus / Plus
Query: 1 cacttaagaatccaccatgagtgagtaagaggtaggacgagagtttgagcccaagatgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacttaagaatccaccatgagtgagtaagaggtaggacgagagtttgagcccaagatgaa 260
Query: 61 ccgtcagctccatcgcacattctctccatggtcatgtttgtgacatgtctacatcttcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccgtcagctccatcgcacattctctccatggtcatgtttgtgacatgtctacatcttcaa 320
Query: 121 agcgctaggcccagagccgtgagggacatgagagacataggtgaatgttaccaagccccc 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agcgctaggcccagagccatgagggacatgagagacataggtgaatgttaccaagccccc 380
Query: 181 actctgaagttgtgatccaggcagcacctattttacggacttatttttggaaagagaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actctgaagttgtgatccaggcagcacctattttacggacttatttttggaaagagaaaa 440
Query: 241 gtcagcagttttcttcttgtttgtaacatttaattaggccaagaatccgtgaatcagaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtcagcagttttcttcttgtttgtaacatttaattaggccaagaatccgtgaatcagaag 500
Query: 301 aaaaatgtcctaatccaggtgcattttctacattagcatttagggcaaattgcccagaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaaaatgtcctaatccaggtgcattttctacattagcatttagggcaaattgcccagaaa 560
Query: 361 tccaatactaatttacccccaagatctcagcccagaattactgttggaattttggcaagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tccaatactaatttacccccaagatctcagcccagaattactgttggaattttggcaagt 620
Query: 421 agacttccctgaggggaacagtcaaattaaggagtcttcttgaagaaaaggtgttaatgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agacttccctgaggggaacagtcaaattaaggagtcttcttgaagaaaaggtgttaatgt 680
Query: 481 cttgggcaacagtt 494
||||||||||||||
Sbjct: 681 cttgggcaacagtt 694
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 894
Length adjustment: 10
Effective length of query: 484
Effective length of database: 884
Effective search space: 427856
Effective search space used: 427856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no132_h03.g1 MSMg01no132_h03.g1 CHROMAT_FILE:
MSMg01no132_h03.g1 PHD_FILE: MSMg01no132_h03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:58 2005
(494 letters)
>mm_chr3_130889477_130890371
Length = 895
Score = 911 bits (471), Expect = 0.0
Identities = 489/495 (98%), Gaps = 1/495 (0%)
Strand = Plus / Minus
Query: 1 tccgagaaaaaccacaacagcggtgtgttgttctcctaaaatagtgactgttccaaagtg 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 695 tccgagaaaaaccacaacagcagtgtgttgttctcctaaaatagtgactgttccaaagtg 636
Query: 61 ctcaagcggaacacagaacacaccttttcttcc-aaaattaaacaaaagtaataatactc 119
||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 635 ctcaagcagaacacagaacacaccttttcttccaaaaattaaacaaaagtaataatactc 576
Query: 120 atttggtgggtttatttattttttttatagctgagaatttaaatctccagttttatcact 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 atttggtgggtttatttattttttttatagctgagaatttaaatctccagttttatcact 516
Query: 180 cacagtggcacagtctgcagatatatgtatatcttagacctgctttgaggttgcgaccca 239
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 515 cacagtggcacagtctgcagatatatgtatatcttagacctgcactgaggttgcgaccca 456
Query: 240 cactggacagcttagtttacatcatggcccctctggggacagcccaaagacattcccgtt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cactggacagcttagtttacatcatggcccctctggggacagcccaaagacattcccgtt 396
Query: 300 caccatggagaacgccatagtggccttgatttttgttttgtgccatccccagcactaaca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 caccatggagaacgccatagtggccttgatttttgttttgtgccatccccagcactaaca 336
Query: 360 acaaataaaacaacccagagcaaaacactaggatctcacaatttccgcagatgtcctgtc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 acaaataaaacaacccagagcaaaacactaggatctcacaatttccgcagatgtcctgtc 276
Query: 420 accaagctacatgcccaattcccgggctaacattcttcttaccttgtctacagagatacc 479
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 275 accaagctacatgcccaattcccgggccaacattcttcttaccttgtctacagagatacc 216
Query: 480 tgggctctactcaaa 494
|||||||||||||||
Sbjct: 215 tgggctctactcaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 895
Length adjustment: 10
Effective length of query: 484
Effective length of database: 885
Effective search space: 428340
Effective search space used: 428340
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
