CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCAGTCATTTGCCTCACTTGCTCTTTCAGCCTTATCAGCTATGGGATGCT
ATCTAGACAAGACTCACAATCCAGCACAGAGACCATACACCCTGTTGTTA
GAAGTGTGCTGGAGACAGAGTGAGACTTTTATGGGGTCTAACTCTGCATA
CACCCAGATGGTTCTGGTTTTCCGGCATTTACATTTATTTATTTCTTCAG
TCCAGTTGGGAATGTGACCTCGTCACTTATTGTTAGTCTCCGCGCTGTTT
AGTGGCTAGATTGTATCCTTTTCTATAGCTTTGAGATACCATTGATCTAA
GCTGGAGTCTCTAGGTTCTTCAGTTTTTCTCAGCTTCCTTATCTGACCTA
CCAAGGAAGGGCAAATGAGTCCCCTCTTCTTCCATCTTCCACCCTAAGCC
GTGCCGTGGGCCTCCTTCACCTTTTCTGGCACTGCTTTGCTACACGGCAT
TAGTCAGGAATGTTTGAGCTGTTGTGTTGTTGGATACCATCTCTCTCTGA
GGCAGATGCCCTCAGCCGCGCTGACCCAGGGAACCCAGCTATGGGATCTG
TCCTGCCTAGCTAGCCGCAGGCAGAGGAAAAGAAGCCACTCTGTAATTTT
CCCAGCAGCCTCCTTAAATCTGTGGGTGACAGCTTGGACACGTTGCCTCG
ATCAGACACGGAAATGAT

AATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXACCTTGTAGTGGCAACCCCCTATGGACCTAAG
GGAGCTATTTTCATTCAAACCACTACAATCCATCTGTGCTGCATACAAGA
AACAAACCTCAACATCAAAGGAGGTATCACCACAAGGTAAAGGGTTGGAA
AAATATATTTCAAGCAAATGGGTCTAAGAAACAAGCTAGGTGGCCATTTT
AATATCTGACAAAACAGGCTTCAACCCAAACTAATCAGAAGAAAGAAGGA
AAGCATCAGAGTCACCAAAAGAGAAATCCACTAAGACGACATTTCACTTC
TTGACATGTGTGTCCCAAACACAGGGACACTCAAGTGCATAAAAGAAATA
CTATGCCATCCTAAATCACTTATTGATCCTCACACACCAAGAGTGGGATT
AATAAATATTCCACTCTTGCCAATAGACAGGTCACCCAGGCAAAAACCAA
ACAGAAATGCTGGCACTAACTGATATTTATACATTTCATCCAAACACACA
CACAAAACACCTTCTTCTCTGCATCTTTCTCCAAAACAAGTCTCAGCAGA
TACAAGAAAATCAAAACAACATCCTGCATCCTTTCTGTCCACCGCACATT
AAAGCTGGATAAAACAAGAACAAAAATAACAGAAATCTCACAAACACATG
GAAACTGAATA

Query= MSMg01no132_k14.b1 MSMg01no132_k14.b1 CHROMAT_FILE:
MSMg01no132_k14.b1 PHD_FILE: MSMg01no132_k14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:14 2005
         (676 letters)



>mm_chr3_57099035_57100110
          Length = 1076

 Score = 1191 bits (616), Expect = 0.0
 Identities = 658/672 (97%), Gaps = 2/672 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcagtcatttgcct-cacttgctctttcagccttatcagctatgggatgctatcta 63
           ||||||||||||||||||  | |||||||||||||||||||||| |||||||||||||||
Sbjct: 875 gaattcagtcatttgcctata-ttgctctttcagccttatcagcgatgggatgctatcta 817

                                                                       
Query: 64  gacaagactcacaatccagcacagagaccatacaccctgttgttagaagtgtgctggaga 123
           |||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 gacaggactcacaaaccagaacagagaccatacaccctgttgttagaagtgtgctggaga 757

                                                                       
Query: 124 cagagtgagacttttatggggtctaactctgcatacacccagatggttctggttttccgg 183
           ||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 756 cagagtgaggcttttatggggtctaactctgcacacacccagatggttccggttttccgg 697

                                                                       
Query: 184 catttacatttatttatttcttcagtccagttgggaatgtgacctcgtcacttattgtta 243
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 696 catttacatttatttatttcttcagtccagttgggaatgtgacctcttcacttattgtta 637

                                                                       
Query: 244 gtctccgcgctgtttagtggctagattgtatccttttctatagctttgagataccattga 303
           ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 636 gtctccgtgctgtttagtggctagattgtatccttttctatagctttgagataccactga 577

                                                                       
Query: 304 tctaagctggagtctctaggttcttcagtttttctcagcttccttatctgacctaccaag 363
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 tctaagctggagtctctagattcttcagtttttctcagcttccttatctgacctaccaag 517

                                                                       
Query: 364 gaagggcaaatgagtcccctcttcttccatcttccaccctaagccgtgccgtgggcctcc 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gaagggcaaatgagtcccctcttcttccatcttccaccctaagccgtgccgtgggcctcc 457

                                                                       
Query: 424 ttcaccttttctggcactgctttgctacacggcattagtcaggaatgtttgagctgttgt 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ttcaccttttctggcactgctttgctacacggcattagtcaggaatgtttgagctgttgt 397

                                                                       
Query: 484 gttgttggataccatctctctctgaggcagatgccctcagccgcgctgacccagggaacc 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 gttgttggataccatctctctctgaggcagatgccctcagccgcgctgacccagggaacc 337

                                                                       
Query: 544 cagctatgggatctgtcctgcctagctagccgcaggcagaggaaaagaagccactctgta 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 cagctatgggatctgtcctgcctagctagccgcaggcagaggaaaagaagccactctgta 277

                                                                       
Query: 604 attttcccagcagcctccttaaatctgtgggtgacagcttggacacgttgcctcgatcag 663
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 attttcccagcagcctccttaaatctgtgggtgacagcttggacacgttgcctcgatcag 217

                       
Query: 664 acacggaaatga 675
           ||||||||||||
Sbjct: 216 acacggaaatga 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1076
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1066
Effective search space:   709956
Effective search space used:   709956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)