AAAATTTGCGGCGCTAAACGACTACTATTTCAAGAGAACCGCGGAATCCT
TTCCTTACGAATATAATTTCCTGATTCACCCTGAGTAAGGATATGCATTT
ATCTGCTATCAAAACAAAACCAGTTTGGACAAGCAAGGAACGTCAAGAAT
TGATGAGTGGGGGAGGCCTTCATCATAAAAACTGCATCTGCATCAAAATC
TCCTGGAGAAAGCCTGCAGGCCTGCTTGCTCTCCTCTCTACTTTCAGCAC
TCATTCAGAACCATACTGGATTCTGCCCCCTCCTGGGCTCAGCCATCCCC
TTCCTGCCTGGCGTGTAGACACCCTGAGACCATCACACCCCATTATCCCA
ACTCCCAGAGGTACTCCAGGGGCATCTAAATACACAGGTGCCCAGGGACC
AGAGCATCCATCTCAGACTCTGCTGTTTCTCACCTGGGGAAACAGGGACT
GTGTTTTGCCTTGTAGGTCAGGCTCAGGCACACCAGTGGTGAGGCATACA
CATAGAAGGATACTGGAGGTATCACCCTCCTTGATTTCAAGCTATACTAT
AATGATATAGTAATAAAAACAGCATGCCATTGGCACAAAACCAGACACTT
CTATCAGTGGAATTGAATTAAAGATCCAAGCATAGGTTAACACACATATG
GACACCTGATTTTTGATAAAGAAGCCAGAAACA

TGAAGTGGTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTCACCTGAAGAATACCGAATGGCTGAGAAGCACCT
GAAAAAATGTGCAGCATCCTTAATCATCAGGAAATGGAAATCAAAACAAC
CCTGAGATTCCATCTCACACCAGTCAGAGTGGCTAAGATAAAAAATTCAG
GTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGAAACACTCCTCCAC
TGCTGGTGGGCTTGCAAGCTTGTAGAAGCTGGAAATAACCCAGATGCCTC
TCAACAGAGGAATGGATAAAAAAAAAATTGTGATACATTTACACAATCGA
GTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGGCAAAT
GGTTGGACATAGACGGCATTATCCTGAGTGAGGTAACCCAATCACAAAAG
AACTCAAATGATATGTACACACTGATAAGTGGATATTAGCCCAGAAACTT
AGAATACCCAAGATATAAGTTACAATTTGCAAAACACATGAAACTCAAGA
AGAAAGAAGACCAAAGTGTGGACACTTTGTCCCTTTTTAGAATTGGGAAC
AATCACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGACCAAA
GGATGGATCATCTAGAGACTGCCATATCCAGGGAATC

Query= MSMg01no133_i03.b1 MSMg01no133_i03.b1 CHROMAT_FILE:
MSMg01no133_i03.b1 PHD_FILE: MSMg01no133_i03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:48:20 2005
         (492 letters)



>mm_chr3_124034263_124035155
          Length = 893

 Score =  733 bits (379), Expect = 0.0
 Identities = 452/493 (91%), Gaps = 29/493 (5%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatttcctgattcaccctgagtaagg-atatgcatttatctgctatcaaaacaaaaccag 59
           ||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||
Sbjct: 201 aatttcctgattcaccctgagtaaggtgtatgcatttatctgctatcaaaataaaaccag 260

                                                                       
Query: 60  tttggacaagcaaggaacgtcaagaattgatgagtgggggaggccttcatcataaaaact 119
           ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 tttggacaagcaaggaaagtcaagaattgatgagtgggggaggcctttatcataaaaact 320

                                                                       
Query: 120 gcatctgcatcaaaatctcctggagaaagcctgcaggcctgcttgctctcctctctactt 179
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 321 gcatctgcatcaaaatctcctggagaaagcctgaaggcctgcttgctctcctctctactt 380

                                                                       
Query: 180 tcagcactcattcagaaccatactggattctgccccctcctgggctcagccatccccttc 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcagcactcattcagaaccatactggattctgccccctcctgggctcagccatccccttc 440

                                                                       
Query: 240 ctgcctggcgtgtagacaccctgagaccatcacaccccattatcccaactcccagaggta 299
           |||||||||||||||||||||||||||| ||| |||||||||||     |    ||    
Sbjct: 441 ctgcctggcgtgtagacaccctgagaccctcagaccccattatc-----t----ga---- 487

                                                                       
Query: 300 ctccaggggcatctaaatacacaggtgcccagggaccagagcatccatctcagactctgc 359
                          |||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 488 ---------------aatacacaggtgcccagggaccagagcatccatctcagactctgt 532

                                                                       
Query: 360 tgtttctcacctggggaaacagggactgtgttttgccttgtaggtcaggctcaggcacac 419
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 533 tgtttctcacctggggaaacagggactgcgttttgccttgtaggtcaggctcaggcacac 592

                                                                       
Query: 420 cagtggtgaggcatacacatagaaggatactggaggtatcaccctccttgatttcaagct 479
           |||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||
Sbjct: 593 cagtggtgaggcatacacatagcaggatactggaggtatcaccatccttgatttgaagct 652

                        
Query: 480 atactataatgat 492
           |||||||||||||
Sbjct: 653 atactataatgat 665


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 893
Length adjustment: 10
Effective length of query: 482
Effective length of database: 883
Effective search space:   425606
Effective search space used:   425606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)