Query= MSMg01no136_a16.b1 MSMg01no136_a16.b1 CHROMAT_FILE:
MSMg01no136_a16.b1 PHD_FILE: MSMg01no136_a16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:18 2005
(640 letters)
>mm_chr3_125207062_125208101
Length = 1040
Score = 648 bits (335), Expect = 0.0
Identities = 383/399 (95%)
Strand = Plus / Minus
Query: 5 gaattcatataaaatggctaggagaaaaatgtaggaaaatgataatgacatttgaacttg 64
||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 399 gaattcatataaaatgggtaggagaaaaatgtagaaaaatgataatgagatttgaactta 340
Query: 65 gaagatgttgaatttatacaccaaaaagagaattttagaattatagtctaacactgtagt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 gaagatgttgaatttatacaccaaaaagagaattttagaattatagtctaacactgtagt 280
Query: 125 tcgctaagttagaaagagggttcaagcatggttgattgtatcataaatagagaggtatcc 184
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 tcgctaagttagaaagaggattcaagcatggttgattgtatcataaatagagaggtatcc 220
Query: 185 caaccttaatcagctgtacatttgccataactgaatgcagaggaagggattcaatagttt 244
||||||||||||||| ||||||| |||||||||||||||||||||| ||||||| ||||
Sbjct: 219 caaccttaatcagctatacatttaccataactgaatgcagaggaagaaattcaatggttt 160
Query: 245 agagaaatttgggtatatgggtgtgcttattattttagatcctcattcacatttgaagga 304
| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 159 aaagaaatttgggtatatgggtgtgcttattattttagatactcgttcacatttgaagga 100
Query: 305 atcataagttatttttcatcaatacttttgaagtaatagttctggaaggtttgaagagct 364
|||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 99 atcagaagttatttttcatcaatgcttttgaagtgatagttctggaaggtttgaagagct 40
Query: 365 ctgattgctcttttatgtaaccttgattttattgtttgc 403
|||||||||||||||||||||||||||||||||||||||
Sbjct: 39 ctgattgctcttttatgtaaccttgattttattgtttgc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1040
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1030
Effective search space: 648900
Effective search space used: 648900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no136_a16.g1 MSMg01no136_a16.g1 CHROMAT_FILE:
MSMg01no136_a16.g1 PHD_FILE: MSMg01no136_a16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:18 2005
(607 letters)
>mm_chr3_125075999_125077006
Length = 1008
Score = 1129 bits (584), Expect = 0.0
Identities = 602/608 (99%), Gaps = 1/608 (0%)
Strand = Plus / Plus
Query: 1 cttagactaataaagagtaaaggaagattgtaactgctgacacgtacgcggaaagaat-a 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 cttagactaataaagagtaaaggaagattgtaactgctgacacgtacgcggaaagaatta 260
Query: 60 atgcttctcagattgaaggtgggttattcctgatgttttctagacattctgttactaagt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgcttctcagattgaaggtgggttattcctgatgttttctagacattctgttactaagt 320
Query: 120 tatgacctagttatttgttttaattttttttgtttgtttatttgtttctattggttttaa 179
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatgtcctagttatttgttttaattttttttgtttgtttatttgtttctattggttttaa 380
Query: 180 ttttaaaattccaccctgataagctaccaaggctgggcttaaatttactctgcaattcaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttttaaaattccaccctgataagctaccaaggctgggcttaaatttactctgcaattcaa 440
Query: 240 gaaggccttgaatttgtcgatgctctccaggtaaacccagcacctgggattataatcaca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaaggccttgaatttgtcgatgctctccaggtaaacccagcacctgggattataatcaca 500
Query: 300 atgagtccttgctttagtcacagatgtcaactagcctctttgcactagcatttatgtgtc 359
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 501 atgagtccttgctttagtcacagatgtcaactagtctctttgcactagcatttatgtgtc 560
Query: 360 gatatatgcttcggaaatatacattttactgtgtttcttttattttaaaatctccttcaa 419
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gatatatgcttcagaaatataaattttactgtgtttcttttattttaaaatctccttcaa 620
Query: 420 tactcttcagagttgtactttataactaatacattaaaattattcactcctttactgaat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tactcttcagagttgtactttataactaatacattaaaattattcactcctttactgaat 680
Query: 480 tggtcttcgtgtaaagtttcattagtaaatgcccagttgtgtgaactactgtctgtgtgg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tggtcttcgtgtaaagtttcattagtaaatgcccagttgtgtgaactactgtctgtgtgg 740
Query: 540 atgacgcaacctattctgttagtttacaacaaaaggctcaaaatatcaagccacagattt 599
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 atgaagcaacctattctgttagtttacaacaaaaggctcaaaatatcaagccacagattt 800
Query: 600 tgatcttt 607
||||||||
Sbjct: 801 tgatcttt 808
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1008
Length adjustment: 10
Effective length of query: 597
Effective length of database: 998
Effective search space: 595806
Effective search space used: 595806
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
