CCCCCNNAATCATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTTTGTTCAGCTCTGAGCCCCATTTTTTAATGGGGTTATT
TGATTTTATGGAGTCCACCTTCTTGAGTTCTTTATATATATTGGATATTA
GTCCCCTATCCGATTTGGGATAGGTAAAGATCCTTTCCCAATCTGTTGGT
GGTCTTTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAG
TTTTATGAGGTCCCATTTATCGATTCTCGATCTTACAGCACAAGCCATTG
CTCTTCTATTCAGGAATTTTCCCCCTGTACCCATCCATATCTTCGAGGCT
TTTCCTTGTTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGGA
GTTCCTTAATCAACTTAGATTTGACACCACCACAAGGAGATAGAAATGGA
TCAATTCACATTCTTCTATTTGTTTTTTAATTAATTTATTTTTTACACTC
CACATTTTATCCCCCCATCCACCCTCTGACTGTTTCACATCTCATACCTC
CTTGCCACCTGCCTGTCTCCACATGAATGCCCCCAACCCTCCACCCCACC
TGACCTCTAAACACCCTGGGGCCTCCAGTTTCTTGAGGGTTAGGCGCATC
ATCTCTGAATGACCTGAGAAAGGTGCATCTTTCTTAGGCTCCT

NCCCAGGACCGATGATAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCGAAGCCTGACAAATA
GAAAGTGGGAGAAACAGCAAGAATCATATATAAAAACACAAAACAAACAG
GAGATAAGGATAATATCAAATTTCCTGTGAAATCAATCATTTCATGGGAA
CAAAATTCTCAAAGTAATAAAAAAATATCATAATCAGACTGCCAAACTAG
ATATTATACATATACACACATTATATAGGTGTGGAGATACCAAGTTTCAT
TTCCTCCAAAAACAACTTCCAAGTAAGTGCACTGGAGTGAGAAAATTAAT
TGCAAACACAGTGGAGTTTTCAGGTTCTTTTTTTTTTTTTTGGATTTTGC
TTAATTCTGTTCTAATTTTAGAGGAGAGTTGAGGTCAATTCTTAATTTAT
TCCTATCATTAAATTCATCAGAAATTATAATTACCTTTATTCCAGTCCTT
AATTATTTTTACCAATAATTTATATAATATTTGAGGGGATTTAAATTGTA
TGATTTAAAAGAATATTTTAATTCATGACAATTATTCTGTAGCATTGATA
ACTGCATTTTTTTTCCATATAGAAAAGCAGCATTTGTTCAAGATAAAAGG
TTACAGCACAGCAGGGCAAGGGAGAAAATTTAACCTACACAATGTGAA

Query= MSMg01no136_a24.g1 MSMg01no136_a24.g1 CHROMAT_FILE:
MSMg01no136_a24.g1 PHD_FILE: MSMg01no136_a24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:19 2005
         (609 letters)



>mm_chr3_17162554_17163561
          Length = 1008

 Score =  901 bits (466), Expect = 0.0
 Identities = 499/516 (96%), Gaps = 12/516 (2%)
 Strand = Plus / Minus

                                                                        
Query: 104  tcatttcatgggaacaaaattctcaaagtaataaaaaaatatcataatcagactgccaaa 163
            ||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1008 tcatttcacaggaacaaaattctcaaagtaat-aaaaaatatcataatcagactgccaaa 950

                                                                        
Query: 164  ctagatattatacatatacacacattatataggtgtggagataccaagtttcatttcctc 223
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 949  ctagatattatacatatacacacattatataggtgtggagataccaagtttcatttcctc 890

                                                                        
Query: 224  caaaaacaacttccaagtaagtgcactggagtgagaaaattaattgcaaacacagtggag 283
            |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 889  caaaaacaacttccaagtaagtgcactggagtgagaaaatcaattgcaaacacagtggag 830

                                                                        
Query: 284  ttttcaggttc----------ttttttttttttttggattttgcttaattctgttctaat 333
            |||||||||||          |||||||||||||||||||||||||||||||||||||||
Sbjct: 829  ttttcaggttcttttttttttttttttttttttttggattttgcttaattctgttctaat 770

                                                                        
Query: 334  tttagaggagagttgaggtcaattcttaatttattcctatcattaaattcatcagaaatt 393
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769  tttagaggagagttgaggtcaattcttaatttattcctatcattaaattcatcagaaatt 710

                                                                        
Query: 394  ataattacctttattccagtccttaattatttttaccaataatttatataatatttgagg 453
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709  ataattgcctttattccagtccttaattatttttaccaataatttatataatatttgagg 650

                                                                        
Query: 454  ggatttaaattgtatgatttaaaagaatattttaattcatgacaattattctgtagcatt 513
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649  ggatttaaattgtatcatttaaaagaatattttaattcatgacaattattctgtagcatt 590

                                                                        
Query: 514  gataactgcattttttttccatatagaaaagcagcatttgttcaagataaaaggttacag 573
            |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589  gataactgca-tttttttccatatagaaaagcagcatttgttcaagataaaaggttacag 531

                                                
Query: 574  cacagcagggcaagggagaaaatttaacctacacaa 609
            ||||||||||||||||||||||||||||||||||||
Sbjct: 530  cacagcagggcaagggagaaaatttaacctacacaa 495


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1008
Length adjustment: 10
Effective length of query: 599
Effective length of database: 998
Effective search space:   597802
Effective search space used:   597802
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)