Query= MSMg01no136_d12.b1 MSMg01no136_d12.b1 CHROMAT_FILE:
MSMg01no136_d12.b1 PHD_FILE: MSMg01no136_d12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:31 2005
(126 letters)
>mm_chr3_8401984_8402510
Length = 527
Score = 205 bits (106), Expect = 8e-58
Identities = 119/124 (95%), Gaps = 3/124 (2%)
Strand = Plus / Plus
Query: 5 gaattctccttctctgtaatttaataatattgataaatcctttatcagaaacac--aaat 62
||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 205 gaattctccttctgtgtaatttaataatattgataaatcctttatcagat-cacctaaat 263
Query: 63 cttttatgagattagtctacccttttattcttcagggctacttagtggtttgttttgttt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cttttatgagattagtctacccttttattcttcagggctacttagtggtttgttttgttt 323
Query: 123 tgtt 126
||||
Sbjct: 324 tgtt 327
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 126
Length of database: 527
Length adjustment: 8
Effective length of query: 118
Effective length of database: 519
Effective search space: 61242
Effective search space used: 61242
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no136_d12.g1 MSMg01no136_d12.g1 CHROMAT_FILE:
MSMg01no136_d12.g1 PHD_FILE: MSMg01no136_d12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:32 2005
(406 letters)
>mm_chr3_8580039_8580842
Length = 804
Score = 681 bits (352), Expect = 0.0
Identities = 390/406 (96%), Gaps = 10/406 (2%)
Strand = Plus / Minus
Query: 1 ctggggtgctctggttttgctcaccatttcctctggaatgtatcatcagctcccagggac 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ctggggtgctctggtttggctcaccatttcctctggaatgtatcatcagctcccagggac 493
Query: 61 aatgaaaacgcctataaggaagttattgtttctgagtgaatgctcgctaatgagtagaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 aatgaaaacgcctataaggaagttattgtttctgagtgaatgctcgctaatgagtagaca 433
Query: 121 aagggggcaggaagggaaaactgcccacagctgttggggtttataactgattctcattgt 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 432 aagggggcaggaagggaaaactgcccacagctgttcgggtttataactgattctcattgt 373
Query: 181 tgtgtttctcagtacgttccttcaccagagcaaatgtacgtgatttacagaggaaatgta 240
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 372 tgtgtttctcagtacgttccttcaccagagcaaatgtatgtgatttacagaggaaatgta 313
Query: 241 gtgtatttgggtttcaaaatgatcagtggaaatatatttacttctgttctgttccagaat 300
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 312 gtgtatttgggtttcaaaatgattagtggaaatatatttacttctgttctgttccagaat 253
Query: 301 tgattataaaattggtcctcattatagggtagtggtgctccgcttcttccctttctctcc 360
||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 252 tgattataaaattggtcctcattatagggtagtggtgct--gtttcttccctttctctcc 195
Query: 361 c--tc----tccctttccctc-ccc-ccctctctctctttctctct 398
| || |||||||||||| ||| |||||||||||| |||||||
Sbjct: 194 ctttccctttccctttccctctccctccctctctctctctctctct 149
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 804
Length adjustment: 9
Effective length of query: 397
Effective length of database: 795
Effective search space: 315615
Effective search space used: 315615
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
