Query= MSMg01no136_i21.b1 MSMg01no136_i21.b1 CHROMAT_FILE:
MSMg01no136_i21.b1 PHD_FILE: MSMg01no136_i21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:58 2005
(648 letters)
>mm_chr3_6167971_6169018
Length = 1048
Score = 1081 bits (559), Expect = 0.0
Identities = 622/645 (96%), Gaps = 6/645 (0%)
Strand = Plus / Plus
Query: 6 gaattctataaaaataccc---gcttaaaactataatatagacagagaacctgatacaga 62
|||||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattctataaaaata--ctaagcttaaaactataatatagacagagaacctgatacaga 263
Query: 63 ccccttttagccctatgcttccagtttgactctcaaagtgttcataagtgctttgcatat 122
||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 264 ccctttttagccctttgcttccagtttcactctcaaagtgttcataagtgctttgcatat 323
Query: 123 ttgattcaaagagcactgttctcccattgtctgtcatcccttctggcccttacattctgg 182
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 324 ttgattcaaagagcactgttctcccattgtctgtcatcccttctggcccttacattcttg 383
Query: 183 cttccctttttccacagagcttctctttcttgagctctgagggggcagatttgaaggggg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 384 cttccctttttccacagagcttctctttcttgagctctgagggggcagatttgaa-gggg 442
Query: 243 acatctgatttagatgctttctatctggctatgagtcacagcatgtattcccatctgctg 302
|||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||
Sbjct: 443 tcatctgatttagatgctttctatctggctatgagtcactgcatctgttcccatctgctg 502
Query: 303 ccagagaaagcttctctgatgattatgagtaagaaacttatctgagtataggagaaaatt 362
||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 503 ccagagaaagcttctctgatgattatgagtaagaaacatatctgagtatagaagaaaatt 562
Query: 363 attaagcatcattttattgataggattttctggactacatattctctggttcttgatcat 422
|||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 563 attaagcatcattttattgataggtttttctggactacatattcgctggttcttgatcat 622
Query: 423 ctaagcagaaaaattaacttggtaagtgctacaaagatagctctacagttaagattattt 482
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 623 ctaagcagaaaaattaacttggtaagtgctacaaagatagctccacagttaagattattt 682
Query: 483 gttcttttagaagatgtgggttcagcttcctagcaccacatgattactgtcaaccttcag 542
|||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 683 gttcttttagaagatgcgggttcagcttcctagcaccacatgattactgttaaccttcag 742
Query: 543 caattctagttcttatgtatctgttgccctcctggatttttcagccactgagcatacata 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 caattctagttcttatgtatctgttgccctcctggatttttcagccactgagcatacata 802
Query: 603 tggttcttagacctacatccagacaaaacaccatacccattaatt 647
||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 803 tggttctcagacctacatgcagacaaaacaccatacccattaatt 847
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space: 662244
Effective search space used: 662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no136_i21.g1 MSMg01no136_i21.g1 CHROMAT_FILE:
MSMg01no136_i21.g1 PHD_FILE: MSMg01no136_i21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:59 2005
(507 letters)
>mm_chr3_6256050_6256956
Length = 907
Score = 791 bits (409), Expect = 0.0
Identities = 424/429 (98%), Gaps = 1/429 (0%)
Strand = Plus / Minus
Query: 80 atgtcaaattgagagactaaatgatgcttttatatcagaattaactcaattcgtattgat 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907 atgtcaaattgagagactaaatgatgcttttatatcagaattaactcaattcgtattgat 848
Query: 140 aatcttatacttttataacatgccaatttagctatatcatctcccaatccagatattatc 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 aatcttatacttttataacatgccaatttagctatatcatctcccaatccagatattatc 788
Query: 200 caccgttagaggattttttgttttg-ttttttgtctttgttttgttttgttttgtttttc 258
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 787 caccgttagaggattttttgttttgtttttttgtctttgttttgttttgttttgtttttc 728
Query: 259 ttttttgttgttgttgttttaatttctgtaaagttttgtgatattctctaggtctataag 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 ttttttgttgttgttgttttaatttctgtaaagttttgtgatattctctaggtctataag 668
Query: 319 gcaattaaaatgttgactactgtttacaccaaagttagccatattctctagaaaagaccc 378
|||||||||||||||||||||||||| || |||||||||||||||| |||||||||||||
Sbjct: 667 gcaattaaaatgttgactactgtttagacaaaagttagccatattcactagaaaagaccc 608
Query: 379 aagcatacagcaaatgtactatatgatcttttcagtgatattgttgaagaaaatggtatg 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 aagcatacagcaaatgtactatatgatcttttcagtgatattgttgaagaaaatggtatg 548
Query: 439 cttttaaatgagtaagctcatttcctgaacaatgatttttatttatatagtgtatctgga 498
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 547 cttttaaatgagtaagctcatttcctgaacaatgatttttatttatatagtatatctgga 488
Query: 499 actttgtga 507
|||||||||
Sbjct: 487 actttgtga 479
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 907
Length adjustment: 10
Effective length of query: 497
Effective length of database: 897
Effective search space: 445809
Effective search space used: 445809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
