Query= MSMg01no136_j02.b1 MSMg01no136_j02.b1 CHROMAT_FILE:
MSMg01no136_j02.b1 PHD_FILE: MSMg01no136_j02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:00 2005
(672 letters)
>mm_chr3_137742076_137743147
Length = 1072
Score = 1162 bits (601), Expect = 0.0
Identities = 652/669 (97%), Gaps = 2/669 (0%)
Strand = Plus / Plus
Query: 5 gaattctcataggtacacgctgaatcctttgtttggtcatttcttgaacttgtacggacg 64
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcataggcccacgctgaatcctttgtttggtcatttcttgaacttgtacggacg 264
Query: 65 tgtgaatgaagtggcttttccatcttctttcaaccaaagcggaatgaaccaagaatctag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgtgaatgaagtggcttttccatcttctttcaaccaaagcggaatgaaccaagaatctag 324
Query: 125 acaatcttctggtgcaagaagccataactcccagcagtatcttttaaccactaagctatc 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 325 acaatcttctggtgcaagaagccataactcccagcagtatcttttaaccactaagctacc 384
Query: 185 taacatgttttctgtaagaaaa-ccatcaatgaagaagtgtcctaaatagagccatgaga 243
|| |||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 385 tatcatgttttctataaaaaaaaccatcaatgaagaagtgtcctaaatagagccatgaga 444
Query: 244 tgaaatctgaacagaatgtgacctggccttagctattgtctctcaaggtcctgtgtgagg 303
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgaaatctaaacagaatgtgacctggccttagctattgtctctcaaggtcctgtgtgagg 504
Query: 304 cttagttttcaggatgatcatgctatactctgggaaggaattttgactcatttactgtct 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cttagttttcaggatgatcatgctatactctgggaaggaattttgactcatttactgtct 564
Query: 364 tttccccattggataatggggtcatgttgaaacaggcccccgtttgacttgtttcttgaa 423
|||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 565 tttccctgttggataatggggtcatgttgaaacaggcccctgtttgacttgtttcttgaa 624
Query: 424 aactaaacagctttgtaaccagtgtgataattcagttccccagaatgtatttctttgaac 483
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aactaaacacctttgtaaccagtgtgataattcagttccccagaatgtatttctttgaac 684
Query: 484 acttatcgagactgtcttcaggagtaaatgaagcccaggattaagtgtctgggtaaatat 543
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 acttattgagactgtcttcaggagtaaatgaagcccaggattaagtgtctgggtaaatat 744
Query: 544 gactcgtctcaaagtaattaagcgaacaatgagttctactctaacagcttcatgacaaat 603
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 745 gactcgtctcaaagtaattaagctaacaatgagttctactctaacagcttcatgacaaat 804
Query: 604 ttcaaaaattagcatgcaattcaaattcatcttgcatcattagaaaatgtccagtggcgt 663
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 805 ttcaaaaattagcatgcaattcaaattcatcttgtgtcattagaaaatgtccagtggcgt 864
Query: 664 acgtacctt 672
|| ||||||
Sbjct: 865 ac-tacctt 872
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1072
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1062
Effective search space: 703044
Effective search space used: 703044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no136_j02.g1 MSMg01no136_j02.g1 CHROMAT_FILE:
MSMg01no136_j02.g1 PHD_FILE: MSMg01no136_j02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:00 2005
(391 letters)
>mm_chr3_137797831_137798621
Length = 791
Score = 743 bits (384), Expect = 0.0
Identities = 389/391 (99%)
Strand = Plus / Minus
Query: 1 aattgagttatgttatatacactttttaaaagaaatttgtacttctactctatattgtat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 aattgagttatgttatatacactttttaaaagaaatttgtacttctactctatattgtat 669
Query: 61 tttaggcttgaaacttccattttaagaagtgcaataaaattattttatcaaaattaaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 tttaggcttgaaacttccattttaagaagtgcaataaaattattttatcaaaattaaatt 609
Query: 121 tttattttctttatattcactggttgaaatcacttttgctagttctcttcagtctgtcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 tttattttctttatattcactggttgaaatcacttttgctagttctcttcagtctgtcaa 549
Query: 181 gccagttctaagtgaccagacaaaatgttagaattctgttagtggtgcacaatgtttttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 gccagttctaagtgaccagacaaaatgttagaattctgttagtggtgcacaatgtttttc 489
Query: 241 tgattattgataagtatgtgtatacatgtttatatgtgtttactgaattctgtttcgaan 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 tgattattgataagtatgtgtatacatgtttatatgtgtttactgaattctgtttcgaaa 429
Query: 301 aacaatgactacattttatcttagattccaaatgtgtcaggcttaagccttaattctact 360
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 428 aacaatgactacattttatcttagattccaaatgtgtcaggcttaggccttaattctact 369
Query: 361 tccattaaagttaataatttaacatttctct 391
|||||||||||||||||||||||||||||||
Sbjct: 368 tccattaaagttaataatttaacatttctct 338
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 391
Length of database: 791
Length adjustment: 9
Effective length of query: 382
Effective length of database: 782
Effective search space: 298724
Effective search space used: 298724
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
