Query= MSMg01no137_b03.b1 MSMg01no137_b03.b1 CHROMAT_FILE:
MSMg01no137_b03.b1 PHD_FILE: MSMg01no137_b03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:38 2005
(626 letters)
>mm_chr3_95647552_95648573
Length = 1022
Score = 1149 bits (594), Expect = 0.0
Identities = 617/626 (98%), Gaps = 4/626 (0%)
Strand = Plus / Minus
Query: 1 tagaatttaataagggttaaatttgttattaaatttgtaactcgacaactttcctttgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 tagaatttaataagggttaaatttgttattaaatttgtaactcgacaactttcctttgct 763
Query: 61 ccaacttaccttcctatcttgtttgatcttgctcttaggctcaattggagaagctgcaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 ccaacttaccttcctatcttgtttgatcttgctcttaggctcaattggagaagctgcaag 703
Query: 121 cagaaatttcacaagctgctagaaaaacaggcattcatacttcgactagacttgccctca 180
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 cagagatttcacaagctgctagaaaaacaggcattcatacttcgactagacttgccctca 643
Query: 181 ttgctcccaaaaaggagctaaaggaaggcgatatccctgagattgagtggtgggactcgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 ttgctcccaaaaaggagctaaaggaaggcgatatccctgagattgagtggtgggactcgt 583
Query: 241 acatcatacccaacggctttgacctgtgagtgtgttaaatgccaagagaaaggtgctaca 300
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 582 acatcatacccaacggctttgacctgtga--gtgttaaatgccaagagaaaggtgctaca 525
Query: 301 gacacgtcaaataccactttaaatgcaaaggaaatagataactacacaacagattttcaa 360
||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 524 gacacctcaaataccactttaaatgcaaagggaatagataactacacaacagattttcaa 465
Query: 361 gctgtcttgagttatatttagcttttggggttagtttaccaaaatcagagacaaataatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 gctgtcttgagttatatttagcttttggggttagtttaccaaaatcagagacaaataatg 405
Query: 421 caaagtgagtctgaaaaacatatatttacttctttatttttgcagtgctggcaatgaacc 480
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 404 caaagtgagtctgaaaaac--atatttacttctttatttttgcagtgctggcaatgaacc 347
Query: 481 cagggcttattttatcttgccatattttcaagttttatattttttcttactatgtattct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 cagggcttattttatcttgccatattttcaagttttatattttttcttactatgtattct 287
Query: 541 atatattttacatgtttataatgatccatttataggtctagggacctagttcagtggttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 atatattttacatgtttataatgatccatttataggtctagggacctagttcagtggttg 227
Query: 601 aacatgtgcctagcgtatggaaggca 626
||||||||||||| |||||||||||
Sbjct: 226 aacatgtgcctagtatatggaaggca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1022
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1012
Effective search space: 623392
Effective search space used: 623392
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no137_b03.g1 MSMg01no137_b03.g1 CHROMAT_FILE:
MSMg01no137_b03.g1 PHD_FILE: MSMg01no137_b03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:38 2005
(333 letters)
>mm_chr3_95491472_95492205
Length = 734
Score = 561 bits (290), Expect = e-164
Identities = 320/330 (96%), Gaps = 1/330 (0%)
Strand = Plus / Plus
Query: 5 ggaattcgccttagggtccgctgttctgagacagtcagagcctaggcggggg-tcgggga 63
|||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||
Sbjct: 205 ggaattcgccttagggtccgctgttctgagacagtcagagcccaggcggggggtcgggga 264
Query: 64 ggttctaccttctctgcgcccgctctctccagctgcctctggtagcggccaccgcggccc 123
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 265 ggttctaccttctctgcgcccgctctctccagctgcctctggtagtggccaccgcggccc 324
Query: 124 ggagccccaggacagcgccgcccgcggcaggctccgccccacgccacccgtgccccgccc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggagccccaggacagcgccgcccgcggcaggctccgccccacgccacccgtgccccgccc 384
Query: 184 gccacgcgccggcctcaaccacccaccccgggtgccccgtacagctaaagggcttgcagc 243
|||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 385 gccacgcgccggactcaaccacccaccccgggtgccccgtacagctaaagagcttgcagc 444
Query: 244 cacgctgtggacacggttttcgcacccgccccggggctcgggaccctaccaactctggca 303
|||||||||||||||||| ||| |||||||||||||||| ||||| |||||||||||||
Sbjct: 445 cacgctgtggacacggttcccgcgcccgccccggggctcgagaccccaccaactctggca 504
Query: 304 ggctccttttggttggagcctgtcctcgaa 333
||||||||||||||||||||||||||||||
Sbjct: 505 ggctccttttggttggagcctgtcctcgaa 534
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 734
Length adjustment: 9
Effective length of query: 324
Effective length of database: 725
Effective search space: 234900
Effective search space used: 234900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
