Query= MSMg01no137_d11.b1 MSMg01no137_d11.b1 CHROMAT_FILE:
MSMg01no137_d11.b1 PHD_FILE: MSMg01no137_d11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:50 2005
(612 letters)
>mm_chr3_97965511_97966522
Length = 1012
Score = 1110 bits (574), Expect = 0.0
Identities = 600/610 (98%), Gaps = 4/610 (0%)
Strand = Plus / Plus
Query: 5 gaattccatgc--gttaccagcaagcagcttcctcaatgttaatatccttgggcctgcta 62
||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccatgctggat--cagcaagcagcttcctcaatgttaatatccttgggcctgcta 262
Query: 63 cttggactgctcatgaattgggccattgtgtggggatgatacatgatgaggaattctgtc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 cttggactgctcatgaattgggccattgtgtggggatgatacatgatgaggaattctgtc 322
Query: 123 agtgcagaggtaggaagagctgcatcatggggacaggacgtacagggtttagtaactgta 182
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 agtgtagaggtaggaagagctgcatcatggggacaggacgtacagggtttagtaactgta 382
Query: 183 gttaccatcagtattttttacacgcatcttataaaatgtcctattgtctgtctgacttcc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gttaccatcagtattttttacacgcatcttataaaatgtcctattgtctgtctgacttcc 442
Query: 243 caaagctacatatcgtagagaggtgtggaaataaaattgtggaaaacaaagaggaatgtg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 caaagctacatatcgtagagaggtgtggaaataaaattgtggaaaacaaagaggaatgtg 502
Query: 303 actgtggttctaaagaagactgcaaaaaagacctgtgctgtgggccggactgtaaatgga 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 actgtggttctaaagaagactgcaaaaaagacctgtgctgtgggccggactgtaaatgga 562
Query: 363 aagaaggtgtcaactgttcctctgggctttgctgtcataagtgtaacttccttccatcag 422
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 563 aagaaggtgtcaactgctcctctgggctttgctgtcataaatgtaacttccttccatcag 622
Query: 423 gatatgtgtgtaggaaggaagtgaatgagtgtgacctcgcagagtactgtgatgggacct 482
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 623 gatatgtgtgtaggaaggaagtgaatgagtgtgacctcgaagagtactgtgatgggacct 682
Query: 483 caggtgtctgtccagatgactcttacaagcaggatggaactccatgcagaaacggaggct 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 caggtgtctgtccagatgactcttacaagcaggatggaactccatgcagaaacggaggct 742
Query: 543 tttgtttccgcaagggatgcagatccaggtacctgcagtgccagtctatctttgggcgta 602
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 tttgtttccgtaagggatgcagatccaggtacctgcagtgccagtctatctttgggcgta 802
Query: 603 aagccaagga 612
||||||||||
Sbjct: 803 aagccaagga 812
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1012
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1002
Effective search space: 603204
Effective search space used: 603204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no137_d11.g1 MSMg01no137_d11.g1 CHROMAT_FILE:
MSMg01no137_d11.g1 PHD_FILE: MSMg01no137_d11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:50 2005
(234 letters)
>mm_chr3_98116668_98117301
Length = 634
Score = 445 bits (230), Expect = e-129
Identities = 233/234 (99%)
Strand = Plus / Minus
Query: 1 ttaactccacatggtgtctgtgtgatcattatccagaaaggccagcagagggcgcccaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 ttaactccacatggtgtctgtgtgatcattatccagaaaggccagcagagggcgcccaca 375
Query: 61 ggccgcctctctaggttttggcagctgaccagcagggtatatagaggaaggttagggtct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ggccgcctctctaggttttggcagctgaccagcagggtatatagaggaaggttagggtct 315
Query: 121 tctggatgtggctaaacacacaggtcatatgctgcagcggtgtagagattctgggtctgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 314 tctggatgtggctaaacacacaggtcatatgctgcagcggtgtagagattccgggtctgg 255
Query: 181 ggaggaggaagtagtttgaaggtcatgtgggagagtatgggggcatttctttgc 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ggaggaggaagtagtttgaaggtcatgtgggagagtatgggggcatttctttgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
