XXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAAGATGCGCGGAATTCT
TTGTTTATCTCCGTACCCCATTTTTATAGGATTGTTTGGTTCTCTGAAGT
CTAACTTCTTGAGTTGTTTGTATATATTGGATATTAGCCCTCAATCAGAT
GAAGGGTTGGTAAAGATCTTTTCCCAATCTGTTGGTTGCCCTTGTGTTCT
ATTGACAGTGTCCTTTGCCTTACAGAAGCTTTGTGATTTCATGAGGTCCC
ATTTGTCAATTCTTGATCTTAGAGCATAAGCTCTGTTGGTGTTCTATTCA
GGAAATTTTCCCCTGAGTCCATGTGCTTGAGGCTCTTCCCCACCTTCTTT
TCTCTTAGTTTCAGTGTATTTGATCTAAGAGGAGGTCATTGATCCAGTTA
GACTTGAGCTTTGTACAAGGAGATAGGAATGGATTCATTTGCATTCTTCT
GCATGCTAATCACCAGTTGAACCAGCACCATTTGTTGAAAAGGCTGTCTC
TTTTCCACTGGATTGTTTTAACTCCTTTGTCAAAGATCAAGTGACCATAT
GTGTGTGGATTCATTTCTGGGTCTTCAATTGTATTCCATTGATCTACCTG
CCCGTCACTGTACCAATACCTGCAGTTTTTATCACTATTGCTCTGTAGTA
CAGCTTAAGATCAGGGATGCTGATTTCCCCAGAAGTTCTTTTATTGTTGA
GAACAGTTTTTGCTTATCCTGAGTTTTTTGTTATCCCAN

GGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXCTCTGCCCAAAGAAAGAAATCTAGAAAATGAATCAGTTGT
GGGATGAGGGTGGAAAGCTGTTCCCGGAAAGGAAGCTGAGTGACAAATCA
TTGGGAATAAAGGCTGGCTTGCAGCGGAGACCCGCTCTGGCTCGCCGCGA
AGACACACTCTGGTTTAGCAGATAGAGCTCTGTTGCTACCTTGGAACTAC
TTTGTTTTTAGTGACTTGACTTTACTGGTGGCCTGTGTAAACTTGACCAA
AGCAATTAAATCTCTAGACAGCTCACTCACTGCGCCAGGTTGGAAGAGAA
AACTAAAGACTGAGCCTGGACGATCAGCAGAGGCAGCTTGTGACTGCTTA
CCAGTTCAGCATGTCTCTACTCATGGTGTGTGTGCATGGTTTTTCAGGCC
ATGTGCTAAATGCTGTTTCAGAGGTTTCCATGTCTGGGGTCAGAGTTCAG
CCAGCTTTTTATATAATGGTTCAAGTAATAAGTGTTTTTGATTTTGCAGG
CTGGGTGATTTTCTCATGTAACCACCAAATTCAGCCATCACAGAACAAAA
TTGGCCGCAGACCATGCACATGCGAATGAATATTTTTGAAAAAAATCTTA
CTTATGGACACTAAAATTGGAATTCTGCGTTTTTTATGTCATAAATGTGA
TGACTGTGGTTTGGT

Query= MSMg01no137_d14.g1 MSMg01no137_d14.g1 CHROMAT_FILE:
MSMg01no137_d14.g1 PHD_FILE: MSMg01no137_d14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:50 2005
         (648 letters)



>mm_chr3_153863451_153864498
          Length = 1048

 Score = 1147 bits (593), Expect = 0.0
 Identities = 635/651 (97%), Gaps = 4/651 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   caaagaaagaaatctagaaaatgaatcagttgtgggatgagggtggaaagctgttcccgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaagaaagaaatctagaaaatgaatcagttgtgggatgagggtggaaagctgttcccgg 260

                                                                       
Query: 61  aaaggaagctgagtgacaaatcattgggaataaaggctggcttgcagcggagacccgctc 120
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 261 aaaggaagctgagtgacaaatcattgggaataaaggctggcttgcagcagagacctgctc 320

                                                                       
Query: 121 tggctcgccgcgaagacacactctggtttagcagatagagctctgttgctaccttggaac 180
           ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||
Sbjct: 321 tggctcgccgcgaagacacactctaacttagcagatagagctctgttgctaccttggaac 380

                                                                       
Query: 181 tactttgtttttagtgacttgactttactggtggcctgtgtaaacttgaccaaagcaatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tactttgtttttagtgacttgactttactggtggcctgtgtaaacttgaccaaagcaatt 440

                                                                       
Query: 241 aaatctctagacagctcactcactgcgccaggttggaagagaaaactaaagactgagcct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaatctctagacagctcactcactgcgccaggttggaagagaaaactaaagactgagcct 500

                                                                       
Query: 301 ggacgatcagcagaggcagcttgtgactgcttaccagttcagcatgtctctactcatggt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggacgatcagcagaggcagcttgtgactgcttaccagttcagcatgtctctactcatggt 560

                                                                       
Query: 361 gtgtgtgcatggtttttcaggccatgtgctaaatgctgtttcagaggtttccatgtctgg 420
           |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 561 gtgtgtgcctggtttttcaggccatgcgctaaatgctgtttcagaggtttccatgtctgg 620

                                                                       
Query: 421 ggtcagagttcagccagctttttatataatggttcaagtaataagtgtttttgattttgc 480
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 621 ggtcagagttcagccagctttttatataatggttcaagtaataaatgtttttgattttgc 680

                                                                       
Query: 481 aggctgggtgattttctcatgtaaccaccaaattcagccatcacagaacaaaattggccg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aggctgggtgattttctcatgtaaccaccaaattcagccatcacagaacaaaattggccg 740

                                                                       
Query: 541 cagaccatgcacatgcgaatgaatattt----ttgaaaaaaatcttacttatggacacta 596
           |||| ||||||||||| |||||||||||    ||||||||| ||||||||||||||||||
Sbjct: 741 cagaacatgcacatgcaaatgaatatttgtttttgaaaaaattcttacttatggacacta 800

                                                              
Query: 597 aaattggaattctgcgttttttatgtcataaatgtgatgactgtggtttgg 647
           ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 801 aaattggaattctgcattttttatgtcataaatgtgatgactgtggtttgg 851


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space:   662244
Effective search space used:   662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)