Query= MSMg01no139_p02.b1 MSMg01no139_p02.b1 CHROMAT_FILE:
MSMg01no139_p02.b1 PHD_FILE: MSMg01no139_p02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:57:30 2005
(516 letters)
>mm_chr3_11459638_11460553
Length = 916
Score = 975 bits (504), Expect = 0.0
Identities = 513/516 (99%)
Strand = Plus / Plus
Query: 1 gcatttattcttttaacttttgctatttctttaacaaggaaaaagaagttcaagcaaatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcatttattcttttaacttttgctatttctttaacaaggaaaaagaagttcaagcaaatc 260
Query: 61 agaacaaaatgaaaaaggattattaaattccctctagtaagcgagatctcctcttcaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaacaaaatgaaaaaggattattaaattccctctagtaagcgagatctcctcttcaagt 320
Query: 121 agaactgttgcagtttctcatgtttagtacgtaactgcctcctactttcagtggctagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaactgttgcagtttctcatgtttagtacgtaactgcctcctactttcagtggctagaa 380
Query: 181 ataagcagatcagtaaggaacagctagaatccacactcacacaaaactcattcattggtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ataagcagatcagtaaggaacagctagaatccacactcacacaaaactcattcattggtg 440
Query: 241 ttatcaagagtctcatcaaaacaatggtacttcatttgttagatatttcctctgtctaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttatcaagagtctcatcaaaacaatggtacttcatttgttagatatttcctctgtctaat 500
Query: 301 attcctacagttaagaattcctatagtaggacatccttcaaataagaaaggttcacagca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 attcctacagttaagaattcctatagtaggacatccttcaaataagaaaggttcacagca 560
Query: 361 aaaatggtattgctaccttgtggaaagggttttcagcacagttcttattttcacacaaag 420
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 561 aaaatggtattgctaccttgtggaaagtgttttcagcacagttcttattttcacacaaag 620
Query: 421 tgtcgcaaatatcctagaatttttctctccctgtcttacatcaatggtaaaaaatgcttt 480
|||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgtcacaaatattctagaatttttctctccctgtcttacatcaatggtaaaaaatgcttt 680
Query: 481 ttaataacagcaatacttaaatagggaaagttttct 516
||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttaataacagcaatacttaaatagggaaagttttct 716
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 916
Length adjustment: 10
Effective length of query: 506
Effective length of database: 906
Effective search space: 458436
Effective search space used: 458436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no139_p02.g1 MSMg01no139_p02.g1 CHROMAT_FILE:
MSMg01no139_p02.g1 PHD_FILE: MSMg01no139_p02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:57:30 2005
(202 letters)
>mm_chr3_11568655_11569255
Length = 601
Score = 271 bits (140), Expect = 2e-77
Identities = 149/152 (98%), Gaps = 1/152 (0%)
Strand = Plus / Minus
Query: 1 tagagaaaaaacattaataaatagaacatgaagcagaaaggatgtctgcaagttgtcctg 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 tagagaaaaaa-attaataaatagaacatgaagcagaaaggatgtctgcaagttgtcctg 246
Query: 61 taacactgtgggtgcagaaagctcagttttaaacagggaagcagtttctctctctctctc 120
|||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 245 taacactgtgggtgcacaaagctcagttttaaacagggaagcagtctctctctctctctc 186
Query: 121 tctctctctctctctctctctctctctctctc 152
||||||||||||||||||||||||||||||||
Sbjct: 185 tctctctctctctctctctctctctctctctc 154
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 57
Number of extensions: 22
Number of successful extensions: 22
Number of sequences better than 10.0: 1
Number of HSP's gapped: 19
Number of HSP's successfully gapped: 1
Length of query: 202
Length of database: 601
Length adjustment: 8
Effective length of query: 194
Effective length of database: 593
Effective search space: 115042
Effective search space used: 115042
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
