CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCGAGAATGCGCGGAAT
TCTTTGTTCATTTCCTGAACCCATTTTTAATGGGATTATTTGATTTTCTG
GAGTCCACCTTCTTGAGTGGAGTACTACTCAGCTATTAAAAAGAATGAAT
TTATGAAATTCCTAGTCAAAGGGAAGGACCTGGAGGGCATCATCCTGAGT
GAGGTAACCCAATCACAAAAGAACACACATGATATGTACTCACTGATAAG
TGGATATTAGCCCAGAAACTTAGAATATCCAAGATACAAGTTGCAAAACA
CATGAAACTCAAGAAGAACGAAGACCAAAGTGTGGTCACTTTGCCCCTTC
TTAGAATTGGGAACACAACACCCATGGAAGGAGTTACAGAGACAATGTTT
GGAGCTGAGACGAAAGGATGGACCATCTACAGACTGTCGCACCGGGGATA
TCATTCTATAATCAGCCTCCAAACACAAGCACCATTGCATATGCCAGCAA
GATTTTGCTGAAAGGACCCTGATATAGGTCTCTCTTGTGAGGCTATGCCG
GTGCCTGGAAAAAACAGAAGTGGATGCTCACAGACAGTTATTCAATGAAA
CACAGGGCCCCCAATGGAGGAGCTAGAGAAAGTACCGAAGGAGCTAAAGG
GGTCTTCAACCCTATTGGAGGAACAACAATATGAACTAACTAGTACCTCC
AGAGCTCATGTCTCTAGCTGCATA

TGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXCTGAAATGACATTTTAAGAGATAACTGAATCT
CCCTTTCTTAACAATTCTGAACAACTCCTTTACAAATAATGAAACTTCAT
GACCAACTCTGCACTCCATGCTGAAAATGTGTGTGTGTTGGGCTTACATG
GATCTGCAAGCTTCCATAATTGCTGTAAGCTCATATATGCAGCAGCATTT
CATGTCTAGAAAACAGTTTTCTTGTGATTATATATATCTTCTTATTTAAT
ACATTTTCTACTCTCTTACACTATTATCTATGGTGTTTCTAGAAAGCAAA
TTTAAACAACTTATTTGTTTTATAACTTAATGTTAAAAGTCTATTAAAAT
TATGATCATTCTCTATGCCACTTTTTTTCTGAATTTAACTTATTTTGCAC
ATACTTCAATTGATTATCATAATGATTATATTATGTAACTAATTACTAGT
GAATCAGTGTGCTTCATTAATTTTAAAAACTAAATCTCAGAGCAATAAAA
TATTTGAAATATAAACTTTTGTTATCTGTTTGTAAATATTTAAAAATACA
TTTCAACCAAAGATTAATATGTTGGTACAATATACAGAAACTATAAAATA
ATACAATTTCTTGCTCTTCTAAAGACATAAGTATTAAAACATTCCCCACA
AGTTTAATAGCACCCA

Query= MSMg01no140_h21.g1 MSMg01no140_h21.g1 CHROMAT_FILE:
MSMg01no140_h21.g1 PHD_FILE: MSMg01no140_h21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:58:14 2005
         (567 letters)



>mm_chr3_71600545_71601512
          Length = 968

 Score = 1044 bits (540), Expect = 0.0
 Identities = 561/568 (98%), Gaps = 1/568 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctgaaatg-acattttaagagataactgaatctccctttcttaacaattctgaacaactc 59
           |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 201 ctgaaatgtacattttaagagataactgaatctctctttcttaacaattctgaacaactc 260

                                                                       
Query: 60  ctttacaaataatgaaacttcatgaccaactctgcactccatgctgaaaatgtgtgtgtg 119
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctttgcaaataatgaaacttcatgaccaactctgcactccatgctgaaaatgtgtgtgtg 320

                                                                       
Query: 120 ttgggcttacatggatctgcaagcttccataattgctgtaagctcatatatgcagcagca 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgggcttacatggatctgcaagcttccataattgctgtaagctcatatatgcagcagca 380

                                                                       
Query: 180 tttcatgtctagaaaacagttttcttgtgattatatatatcttcttatttaatacatttt 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttcatgtctagaaaacagttttcttgtgattatatatatcttcttatttaatacatttt 440

                                                                       
Query: 240 ctactctcttacactattatctatggtgtttctagaaagcaaatttaaacaacttatttg 299
           || ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||
Sbjct: 441 ctcctctcttacacgattatctatggtgtttctagcaagcaaatttaaacaacttatgtg 500

                                                                       
Query: 300 ttttataacttaatgttaaaagtctattaaaattatgatcattctctatgccactttttt 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttttataacttaatgttaaaagtctattaaaattatgatcattctctatgccactttttt 560

                                                                       
Query: 360 tctgaatttaacttattttgcacatacttcaattgattatcataatgattatattatgta 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tctgaatttaacttattttgcacatacttcaattgattatcataatgattatattatgta 620

                                                                       
Query: 420 actaattactagtgaatcagtgtgcttcattaattttaaaaactaaatctcagagcaata 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 actaattactagtgaatcagtgtgcttcattaattttaaaaactaaatctcagagcaata 680

                                                                       
Query: 480 aaatatttgaaatataaacttttgttatctgtttgtaaatatttaaaaatacatttcaac 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaatatttgaaatataaacttttgttatctgtttgtaaatatttaaaaatacatttcaac 740

                                       
Query: 540 caaagattaatatgttggtacaatatac 567
           ||||||||||||||||||||||||||||
Sbjct: 741 caaagattaatatgttggtacaatatac 768


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 968
Length adjustment: 10
Effective length of query: 557
Effective length of database: 958
Effective search space:   533606
Effective search space used:   533606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)