Query= MSMg01no143_h21.b1 MSMg01no143_h21.b1 CHROMAT_FILE:
MSMg01no143_h21.b1 PHD_FILE: MSMg01no143_h21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:04 2005
(634 letters)
>mm_chr3_37084756_37085789
Length = 1034
Score = 1218 bits (630), Expect = 0.0
Identities = 630/630 (100%)
Strand = Plus / Minus
Query: 5 ggaattcattacctttctcttctagtttctggatcaagatgtatacagggtcctgaccac 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 947 ggaattcattacctttctcttctagtttctggatcaagatgtatacagggtcctgaccac 888
Query: 65 cctaaagtctgaagaggaattcttcctgccttcttgtagcttttgggttgctgtcagtct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 887 cctaaagtctgaagaggaattcttcctgccttcttgtagcttttgggttgctgtcagtct 828
Query: 125 ttgatatacatccccttccactgatggttgtcctctggtatttgccacatcccacttccc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 827 ttgatatacatccccttccactgatggttgtcctctggtatttgccacatcccacttccc 768
Query: 185 atagctctccatgtaaagatggcagacacactggatcagggtgctggttctccagtgtga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 atagctctccatgtaaagatggcagacacactggatcagggtgctggttctccagtgtga 708
Query: 245 tctcaagtaattatgtgtggaaagcctgtttccaaacgaagtcacattctgaggttaggg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 tctcaagtaattatgtgtggaaagcctgtttccaaacgaagtcacattctgaggttaggg 648
Query: 305 ctccactgtgacttcctgggaggggtggggatacagtgggatcctcacctgggttaggca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 ctccactgtgacttcctgggaggggtggggatacagtgggatcctcacctgggttaggca 588
Query: 365 gtttgacactctgcactgatccacagtgagtctcttcagcctggacatctccttgtatca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 gtttgacactctgcactgatccacagtgagtctcttcagcctggacatctccttgtatca 528
Query: 425 aggcattgccttgggaactaccttatacattaaattaaataaataaaaatgatattggag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 aggcattgccttgggaactaccttatacattaaattaaataaataaaaatgatattggag 468
Query: 485 acacttggactttgattgtaaaaatggacatgcttaagataaatagtacatcgttcataa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 acacttggactttgattgtaaaaatggacatgcttaagataaatagtacatcgttcataa 408
Query: 545 ttaagaaaaaaattgaactcagcagatcacaacactgacttcatatggagcttccttggg 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 ttaagaaaaaaattgaactcagcagatcacaacactgacttcatatggagcttccttggg 348
Query: 605 tacatgaataggttctcattgtaaatcagg 634
||||||||||||||||||||||||||||||
Sbjct: 347 tacatgaataggttctcattgtaaatcagg 318
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space: 638976
Effective search space used: 638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no143_h21.g1 MSMg01no143_h21.g1 CHROMAT_FILE:
MSMg01no143_h21.g1 PHD_FILE: MSMg01no143_h21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:04 2005
(418 letters)
>mm_chr3_36960133_36960950
Length = 818
Score = 803 bits (415), Expect = 0.0
Identities = 418/419 (99%), Gaps = 1/419 (0%)
Strand = Plus / Plus
Query: 1 tgtctccctggctcaa-tcagccattttctgattcatcacttcatctatccctcaattag 59
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tgtctccctggctcaaatcagccattttctgattcatcacttcatctatccctcaattag 259
Query: 60 atgacattgtctgggacctgtactctttaaatatatctaagcataagaaacaagacttaa 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 atgacattgtctgggacctgtactctttaaatatatctaagcataagaaacaagacttaa 319
Query: 120 aaaaaaatcacagaccacaggagacaaaggaaaaagtgcctgaatgtatgtggcaacctc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aaaaaaatcacagaccacaggagacaaaggaaaaagtgcctgaatgtatgtggcaacctc 379
Query: 180 tgaatcctaaaagaaattggagattattacagaaactctgaagtccaaaagaatgtatta 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgaatcctaaaagaaattggagattattacagaaactctgaagtccaaaagaatgtatta 439
Query: 240 taatatttcttagttttagtcaatttgtcgtggttatacaaagtaacacaaggggaaaca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 taatatttcttagttttagtcaatttgtcgtggttatacaaagtaacacaaggggaaaca 499
Query: 300 gagggacttttatcatcatttttctgtatattgtatattttaaatactctctctctctct 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gagggacttttatcatcatttttctgtatattgtatattttaaatactctctctctctct 559
Query: 360 cctctgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 418
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cctctgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 618
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 60
Number of extensions: 18
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 15
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 818
Length adjustment: 9
Effective length of query: 409
Effective length of database: 809
Effective search space: 330881
Effective search space used: 330881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
