Query= MSMg01no144_b18.b1 MSMg01no144_b18.b1 CHROMAT_FILE:
MSMg01no144_b18.b1 PHD_FILE: MSMg01no144_b18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:50 2005
(661 letters)
>mm_chr3_113645055_113646115
Length = 1061
Score = 824 bits (426), Expect = 0.0
Identities = 441/446 (98%), Gaps = 2/446 (0%)
Strand = Plus / Minus
Query: 217 cagacctagacaatgataacaccaattaacaccccaatgctgatggaagaaacctcacaa 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1061 cagacctagacaatgataacaccaattaacaccccaatgctgatggaagaaacctcacaa 1002
Query: 277 ggcccattgaaatacacaagtatacccacaggaaaaaaataagttgttcagaaacatgca 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1001 ggcccattgaaatacacaagtatacccacaggaaaaaaataagttgttcagaaacatgca 942
Query: 337 gacacccacacacatagatagataggtagagagagagagagagagagagagagagagaga 396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 941 gacacccacacacatagatagataggtagagagagagagagagagagagagagagagaga 882
Query: 397 gagagag-agagagagtgagaacatttacaaaggaaaaatctcatccaatatgtacagaa 455
||||||| | || |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 881 gagagagta-agtgagtgagaacatttacaaaggaaaaaactcatccaatatgtacagaa 823
Query: 456 gacttaagtaagtatagaaaataaaaataaaacatacccccacatccttagttgagtaag 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 gacttaagtaagtatagaaaataaaaataaaacatacccccacatccttagttgagtaag 763
Query: 516 aaaaaagtaaagtgacccatgtgctcacatgttagggacagacgacaaccttgggtttca 575
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 762 aaaaaagtaaagtgacccatgtgctcacatgttagggacagaagacaaccttgggtttca 703
Query: 576 gttgtcaccttctatatggtttgtgaaagggcctcttgtttttcactgtctatgccatgc 635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 gttgtcaccttctatatggtttgtgaaagggcctcttgtttttcactgtctatgccatgc 643
Query: 636 tagttactaggtaaatttccagaaat 661
||||||||||||||||||||||||||
Sbjct: 642 tagttactaggtaaatttccagaaat 617
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 58
Number of extensions: 17
Number of successful extensions: 17
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1061
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1051
Effective search space: 684201
Effective search space used: 684201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no144_b18.g1 MSMg01no144_b18.g1 CHROMAT_FILE:
MSMg01no144_b18.g1 PHD_FILE: MSMg01no144_b18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:51 2005
(339 letters)
>mm_chr3_113499023_113499761
Length = 739
Score = 642 bits (332), Expect = 0.0
Identities = 335/336 (99%)
Strand = Plus / Plus
Query: 1 aactatcagattcgactatttcaattgctgcttttagcttgtctaggagggtgctaacca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aactatcagattcgactatttcaattgctgcttttagcttgtctaggagggtgctaacca 260
Query: 61 tgctgtttatttttataggagggcaagttaaatattcaaactcctatcatttcccagaat 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgctgtttatttttataggagggcaagttaaatattcaaactcctatcatttcccagaaa 320
Query: 121 aaagtgaatgttgaatagtgaataatgaataagagtctaaatgtagcaaagctttggaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaagtgaatgttgaatagtgaataatgaataagagtctaaatgtagcaaagctttggaca 380
Query: 181 gaaagatttgtgctagacaaataaagatggtaaatgtggtagaatatgtatacatggtac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaaagatttgtgctagacaaataaagatggtaaatgtggtagaatatgtatacatggtac 440
Query: 241 aacagttctttcaaagtgagcacaggtccctctctactgttgtgaaaagctccattcatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aacagttctttcaaagtgagcacaggtccctctctactgttgtgaaaagctccattcatt 500
Query: 301 tacacatgagctgtgaatataggtgagtgtgtgtgg 336
||||||||||||||||||||||||||||||||||||
Sbjct: 501 tacacatgagctgtgaatataggtgagtgtgtgtgg 536
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 739
Length adjustment: 9
Effective length of query: 330
Effective length of database: 730
Effective search space: 240900
Effective search space used: 240900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
