CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGCAGAGGATCCGCGG
AATTCTCCACTTCGGCCAGAACATTGGTGAGCATGACTATGCTTGCTTCT
GTGTAAACAGTGAATCATGGAAAAGACAGTGACTGGCATGATTAAATCGT
CGAAGTCAATGCCCTACATGATAGTTTTAACTCCTTACAGCATCTAGCTT
GCTACTAGGACAAACTAGTCCTGAGCAAATGTGACTATAGTGAGGTCTAC
GGGTTTAGGTAAATTGGTGGAATGCCCCCTTTTGGTACCCATGAGGCTGT
GCTGCATCCCCTGAACAGGATGCCTGTAATCCTAGACAATGAGAAGAAGA
TGCCTGAGTATCAGGAATTCATAGTCATTCCTAGTTACACAGTGTGTGTA
AGGAAAGCCCGAGCTACCCGAGCCCTAAAGAAAAAGAATATTAATACTGT
AACAAAATATGGAAGAGGTTGGTGGCAATTACCCAGGGCATCGATTGCCT
TGAGAAATGGATCTTTTTCCAGAGAACTCTACCTAAAACAAAACAGATTT
AGAAAACCACCTGTAAGATGTCAGAGAACTCACTGATCAAATGTCTTTTG
GAAAAGTCCTGTAAATTATCTGGATAGATATTATGCAATATTTTTCAGCT
ACTTTCCCGTGATGTGAAAGCCAGCTGCTAATTACTACATAACTGCCCGA
TAACTGAGCATCATATGCCATCTCTACCAGAATCTTCTTCTCG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCA
GAGAAGCACTTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCA
AATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCGAAGA
TCAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGA
ACACTCCTCCATTGTTGGTGGGAGTGCAGGCTTGTACAACCACTCTGGAA
ATCAGTCTGGCGGTTCCTCAGAAAACTGGACATAGTACTACCGGAGGATC
CAGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACAGGTAAG
AAGGACACATGCTCCACCACGCCCATAGCAGCCTTATTTATAATAGCCAG
AAGCTGGAAAGAACCTAGATGCCCCTCAACAGAGGAATGGATACAGAAAA
TGTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAA
TTTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAG
TGAGGCAACACATTCACAAAGAAACTCACACAATATGTATTCACTGATAA
GTGGATATTAGCCCCAAACCTAGGATACCCAAGATATATAATTTGCTAAA
CCATGAAACTCCAGAAGAATGAAGACTGAAGTGTGCACACTATGCCCN

Query= MSMg01no144_c14.b1 MSMg01no144_c14.b1 CHROMAT_FILE:
MSMg01no144_c14.b1 PHD_FILE: MSMg01no144_c14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:54 2005
         (524 letters)



>mm_chr3_24220374_24221297
          Length = 924

 Score =  868 bits (449), Expect = 0.0
 Identities = 470/477 (98%)
 Strand = Plus / Minus

                                                                       
Query: 8   gaattctccacttcggccagaacattggtgagcatgactatgcttgcttctgtgtaaaca 67
           ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 gaattctccacttcggaaagaacattggtgagcatgactatgcttgcttctgtgtaaaca 418

                                                                       
Query: 68  gtgaatcatggaaaagacagtgactggcatgattaaatcgtcgaagtcaatgccctacat 127
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gtgaatcatggaaaagacagtgactggcatgattaaatcgtcgaagtcaatgccctacat 358

                                                                       
Query: 128 gatagttttaactccttacagcatctagcttgctactaggacaaactagtcctgagcaaa 187
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 357 gatagttttaactccttacagcatctagcttgctactagcacaaactagtcctgagcaaa 298

                                                                       
Query: 188 tgtgactatagtgaggtctacgggtttaggtaaattggtggaatgcccccttttggtacc 247
           ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||
Sbjct: 297 tgtgactatagtgaggtctacgggtttaggtaagttggtggaatgcccccttgtggtacc 238

                                                                       
Query: 248 catgaggctgtgctgcatcccctgaacaggatgcctgtaatcctagacaatgagaagaag 307
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 catgaggctgtgctgcatcccctgaacaggatgcctgtaatcctagacaatgagaagaag 178

                                                                       
Query: 308 atgcctgagtatcaggaattcatagtcattcctagttacacagtgtgtgtaaggaaagcc 367
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 atgcctgagtatcaggaattcatagtcattcctagttacacagtgtgtgtaaggaaagcc 118

                                                                       
Query: 368 cgagctacccgagccctaaagaaaaagaatattaatactgtaacaaaatatggaagaggt 427
           ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 cgagctacatgagccctaaagaaaaagaatattaatactgtaacaaaatatggaagaggt 58

                                                                    
Query: 428 tggtggcaattacccagggcatcgattgccttgagaaatggatctttttccagagaa 484
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57  tggtggcaattacccagggcatcgattgccttgagaaatggatctttttccagagaa 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 924
Length adjustment: 10
Effective length of query: 514
Effective length of database: 914
Effective search space:   469796
Effective search space used:   469796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)