Query= MSMg01no144_e22.b1 MSMg01no144_e22.b1 CHROMAT_FILE:
MSMg01no144_e22.b1 PHD_FILE: MSMg01no144_e22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:05:06 2005
(657 letters)
>mm_chr3_38310936_38311991
Length = 1056
Score = 1199 bits (620), Expect = 0.0
Identities = 644/656 (98%), Gaps = 9/656 (1%)
Strand = Plus / Plus
Query: 6 gaattcacaccctcatccgcaaacacaaactgaaagtggcaagaaaaaaaattagtttcc 65
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcacaccctcaacagcaaacacaaactgaaagtggcaagaaaaaaaattagtttcc 265
Query: 66 aaaacctgcccctagtgatgtactgccttcaggagacctcaccaccttaccctcctcaag 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 aaaacctgcccctagtgatgtactgccttcaggagacctcaccaccttaccctcctcaag 325
Query: 126 taatgtgactcactgaggaagatgtgctcaagtatcccaggctatggtgtgtgtgtgggg 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 taatgtgactcactgaggaagatgtgctcaagtatcccaggctatggtgtgtgtgtgggg 385
Query: 186 tgtcatttctcattcaagtcacccttgtgtgtccatggatagatattactgtttaatctc 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tgtcatttctcattcaagtcacccttgtgtgtccatggatagatattactgtttaatctc 445
Query: 246 tttcttaaataaaaaaaaaaatcaactagcttaccaagtatccagttcccttctggcatt 305
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tttcttaaataaaaaaaaaa-tcaactagcttaccaagtatccagttcccttctggcatt 504
Query: 306 tggatgaccatgcccctgctaccttcccttccatccccccactccctgctcaccatatgg 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tggatgaccatgcccctgctaccttcccttccatccccccactccctgctcaccatatgg 564
Query: 366 tctgacaccacccc----aagccttcacactctggtgtccttcatgcatggtcatacagt 421
|||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tctgacacta----ggttaagccttcacactctggtgtccttcatgcatggtcatacagt 620
Query: 422 gtgcattctacaattctctgtcaccctcaggttctttctttccccttcgatggggcactt 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtgcattctacaattctctgtcaccctcaggttctttctttccccttcgatggggcactt 680
Query: 482 tctagctccctacctgttcatgcccacatagatgcacctatgttaaaagtagaaactagg 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tctagctccctacctgttcatgcccacatagatgcacctatgttaaaagtagaaactagg 740
Query: 542 gtgcacagatgagagggcatataggttttgcctttcagggtccatgcttactgttcacct 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gtgcacagatgagagggcatataggttttgcctttcagggtccatgcttactgttcacct 800
Query: 602 tttatgcttcaataatttcagtatttccattctgaataattcctatgactctatag 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tttatgcttcaataatttcagtatttccattctgaataattcctatgactctatag 856
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1056
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1046
Effective search space: 676762
Effective search space used: 676762
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no144_e22.g1 MSMg01no144_e22.g1 CHROMAT_FILE:
MSMg01no144_e22.g1 PHD_FILE: MSMg01no144_e22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:05:06 2005
(198 letters)
>mm_chr3_38392532_38393129
Length = 598
Score = 362 bits (187), Expect = e-104
Identities = 193/195 (98%)
Strand = Plus / Minus
Query: 1 gtggctgcatgtctgcactaaccagggaaagctctgctttctaaccagggaaagttcgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 gtggctgcatgtctgcactaaccagggaaagctctgctttctaaccagggaaagttcgag 336
Query: 61 tgagaaagccctcagccaaagtggcagcttaagaggcaagatgaactccagaacatgtgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgagaaagccctcagccaaagtggcagcttaagaggcaagatgaactccagaacatgtgt 276
Query: 121 tctgagggtcttaggctgtatatgtgcagtgtggctcaggcagagaatgcacacagtaga 180
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 tctgagggtcagaggctgtatatgtgcagtgtggctcaggcagagaatgcacacagtaga 216
Query: 181 acaaagcacagaagt 195
|||||||||||||||
Sbjct: 215 acaaagcacagaagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 198
Length of database: 598
Length adjustment: 8
Effective length of query: 190
Effective length of database: 590
Effective search space: 112100
Effective search space used: 112100
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
