CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCACTTACACTACCTCAAATATTGTGGCTTAAGATAGATGCTAAGAA
CCTTTAAAATGAAGCTTACAAAACCGAGGTTCTATGGCATGTTTAGGTGA
AGACGAATTTGGCTTTATTTTCTTTGGAGAGTTTCTTTACGTGCTTGTAT
TTTTAGGCATCGCTGCAGAGTGGAAAGAACACTGGACCTGACGTCAGGAG
CTCTGGGTTCTATTTCTGACTGTTGATCTTCTGGGAAGCCATGGGGGAGA
CACGTTATTAAAGAGAGCATTACTTACTTGAGTCACAGAGCTTAGCAGAG
GGCTACCAGCTCAGTGGAGGACAGTGTTCATAGCAGAGGGTTCCTCAGAA
CTCTGTCTCCTCTTACGCCAGCATCACGTAGCTCTTCCTTTTTGGCTTAA
GGACCTTTGGAGGGAGGTGTAGAGGTATTATTACATTAATATTGAAAGGA
AATGGAAAAAGGGCCCTTGCAATGTTGATAATAATTGGCTACTAATTAAA
TTATTATTCTGAATAATAACTAATATAAATGATTATCTCGAGAGAAAGAG
ATGATGATTGGAGACTTACTGCTACTTCAAGACACTTGGAAACTTTCACC
TCCACAATGACTCTGGGGGACCTCCCACCAACAATAATACTGCTCTGAAC
CCCATTCTTGCCTCAGAACGTCATTTTCTCCATCCTGTTCTTN

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAG
AGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAA
ATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGAT
CAAAAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAA
CACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAAA
TCAGTCTGGCGGTTCCTCAGAAAATTGGGCATAGTACTACCAGAGGATCC
AGCATTACCTCTCCTGTGCATATATCCAGAAGATGCCCCAACTGGTAAGA
AGGACACATGCTCCACTACGTTCATAGCAGCCTTATTTATAATAGCCAGA
AGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAAT
GTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAAT
TTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGT
GAGGTAACACATTCACAAAGGAACTCACACAATATGTACTCACTGATAAG
TGGATATTAGCCCCAAATCTAGGATTCCCAAGATATAAGATACAATTTGC
TAAACACATGANACTCTAGAAGAATGAAGACTGAAGTGTGGACAC

Query= MSMg01no144_g18.b1 MSMg01no144_g18.b1 CHROMAT_FILE:
MSMg01no144_g18.b1 PHD_FILE: MSMg01no144_g18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:05:15 2005
         (682 letters)



>mm_chr3_142077545_142078626
          Length = 1082

 Score = 1199 bits (620), Expect = 0.0
 Identities = 647/656 (98%)
 Strand = Plus / Minus

                                                                        
Query: 27   atattgtggcttaagatagatgctaagaacctttaaaatgaagcttacaaaaccgaggtt 86
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1082 atattgtggcttaagatagatgctaagaacctttaaaatgaagcttacaaaaccgaggtt 1023

                                                                        
Query: 87   ctatggcatgtttaggtgaagacgaatttggctttattttctttggagagtttctttacg 146
            |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct: 1022 ctatggcatgtttaggtgaagatgaatttggctttcttttctttggagagtttctttacg 963

                                                                        
Query: 147  tgcttgtatttttaggcatcgctgcagagtggaaagaacactggacctgacgtcaggagc 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962  tgcttgtatttttaggcatcgctgcagagtggaaagaacactggacctgacgtcaggagc 903

                                                                        
Query: 207  tctgggttctatttctgactgttgatcttctgggaagccatgggggagacacgttattaa 266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902  tctgggttctatttctgactgttgatcttctgggaagccatgggggagacacgttattaa 843

                                                                        
Query: 267  agagagcattacttacttgagtcacagagcttagcagagggctaccagctcagtggagga 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842  agagagcattacttacttgagtcacagagcttagcagagggctaccagctcagtggagga 783

                                                                        
Query: 327  cagtgttcatagcagagggttcctcagaactctgtctcctcttacgccagcatcacgtag 386
            ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 782  cagtgttcatagcagagggttcctcagaactctgtcttctcttacgtcagcatcacgtag 723

                                                                        
Query: 387  ctcttcctttttggcttaaggacctttggagggaggtgtagaggtattattacattaata 446
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 722  ctcttcctttttggcttaaggacctttggagggaggtgtaggggtattattacattaata 663

                                                                        
Query: 447  ttgaaaggaaatggaaaaagggcccttgcaatgttgataataattggctactaattaaat 506
            ||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||
Sbjct: 662  ttgaaaggaaatggaaaaaaggccctagcaatgttgataataattggttactaattaaat 603

                                                                        
Query: 507  tattattctgaataataactaatataaatgattatctcgagagaaagagatgatgattgg 566
            |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 602  tattattctgaataataattaatataaatgattatctcgagagaaagagatgatgattgg 543

                                                                        
Query: 567  agacttactgctacttcaagacacttggaaactttcacctccacaatgactctgggggac 626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542  agacttactgctacttcaagacacttggaaactttcacctccacaatgactctgggggac 483

                                                                    
Query: 627  ctcccaccaacaataatactgctctgaaccccattcttgcctcagaacgtcatttt 682
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482  ctcccaccaacaataatactgctctgaaccccattcttgcctcagaacgtcatttt 427


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 682
Length of database: 1082
Length adjustment: 10
Effective length of query: 672
Effective length of database: 1072
Effective search space:   720384
Effective search space used:   720384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)