Query= MSMg01no144_i09.b1 MSMg01no144_i09.b1 CHROMAT_FILE:
MSMg01no144_i09.b1 PHD_FILE: MSMg01no144_i09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:05:22 2005
(239 letters)
>mm_chr3_25666513_25667152
Length = 640
Score = 398 bits (206), Expect = e-115
Identities = 227/236 (96%), Gaps = 5/236 (2%)
Strand = Plus / Minus
Query: 5 gaattcttgaggatcac---acattaggttgacatttagccttgaacctggtacagtatg 61
||||||||||||| || |||||||||||||||||||||||||||||||| |||||||
Sbjct: 438 gaattcttgagga--acaagacattaggttgacatttagccttgaacctggtgcagtatg 381
Query: 62 tttttgttataatactatttttatgatggactgagaacagggtcttcttcactcctgcac 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tttttgttataatactatttttatgatggactgagaacagggtcttcttcactcctgcac 321
Query: 122 tctgcatgtgtcagacatggcagtttacattcctgactgcacatatgatcacagagcaat 181
||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 320 tctacatgtgtcagacatggcagtttacattcctgactgcacatatgagcacagagcaat 261
Query: 182 gcctgccaatagctcatcccatcagacaacagcattagccatggacacagtcggga 237
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 260 gcctgccaatagctcatcccattagacaacagcattagccatggacacagtcggga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 640
Length adjustment: 9
Effective length of query: 230
Effective length of database: 631
Effective search space: 145130
Effective search space used: 145130
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no144_i09.g1 MSMg01no144_i09.g1 CHROMAT_FILE:
MSMg01no144_i09.g1 PHD_FILE: MSMg01no144_i09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:05:23 2005
(225 letters)
>mm_chr3_25508323_25508947
Length = 625
Score = 414 bits (214), Expect = e-120
Identities = 223/226 (98%), Gaps = 2/226 (0%)
Strand = Plus / Plus
Query: 1 cattgacatgaataaaaatttcccatctgtgtattaagaaaacattcataaaattgtata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cattgacatgaataaaaatttcccatctgtgtattaagaaaacattcataaaattgtata 260
Query: 61 attatagtcatttatatgtagctagcatctctctacagtggcatttataaccattgtctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attatagtcatttatatgtagctagcatctctctacagtggcatttataaccattgtctc 320
Query: 121 attactccaaaagtgttccatgtgtggataaatagaatcctttcaactattctgttgtgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attactccaaaagtgttccatgtgtggataaatagaatcctttcaactattctgttgtgc 380
Query: 181 caaaagtctgaagtct-ctggtttaaaaccacagatacacacacac 225
|||||||||||||| | |||||||||||||||||| ||||||||||
Sbjct: 381 caaaagtctgaagt-tactggtttaaaaccacagacacacacacac 425
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 225
Length of database: 625
Length adjustment: 9
Effective length of query: 216
Effective length of database: 616
Effective search space: 133056
Effective search space used: 133056
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
