Query= MSMg01no145_j10.b1 MSMg01no145_j10.b1 CHROMAT_FILE:
MSMg01no145_j10.b1 PHD_FILE: MSMg01no145_j10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:06:43 2005
(347 letters)
>mm_chr3_155851570_155852316
Length = 747
Score = 578 bits (299), Expect = e-169
Identities = 329/347 (94%), Gaps = 13/347 (3%)
Strand = Plus / Minus
Query: 1 caagagtgatgaaatggatattaaagaaggcaatattatctagaaatcacaaaccctttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 caagagtgatgaaatggatattaaagaaggcaatattatctagaaatcacaaaccctttt 352
Query: 61 ttcagaatactgagaggtagctggagaaaacattcttaccatagtcccagtgggctccat 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ttcagaatcctgagaggtagctggagaaaacattcttaccatagtcccagtgggctccat 292
Query: 121 agcctcactgtgggtttgtgtgagagaaggaaagggctgttgagcagtgttggtagtgag 180
|||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct: 291 agcctcactgtgggtttgtgtgggagaaggaaaggactgttgagcagtgttggtagtgag 232
Query: 181 caaactaaatcaccatggaaggtttccgtttttcacaatgtgatgggtttgcctcaaagg 240
||||||||||||| |||||||| |||||||| ||||||||||||||||
Sbjct: 231 caaactaaatcactatggaaggcttccgttt-------------gggtttgcctcaaagg 185
Query: 241 aatatgaaggagcagacatacaccctggctttctacttgaatcatggcagtgaggcagga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 aatatgaaggagcagacatacaccctggctttctacttgaatcatggcagtgaggcagga 125
Query: 301 tggggaaaggttctcagtcacaaataaaagtcaacttattggtaact 347
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 tggggaaaggttctcagtcacaaataaaagtcaacttattggtaact 78
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 347
Length of database: 747
Length adjustment: 9
Effective length of query: 338
Effective length of database: 738
Effective search space: 249444
Effective search space used: 249444
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no145_j10.g1 MSMg01no145_j10.g1 CHROMAT_FILE:
MSMg01no145_j10.g1 PHD_FILE: MSMg01no145_j10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:06:43 2005
(451 letters)
>mm_chr3_155696219_155697069
Length = 851
Score = 826 bits (427), Expect = 0.0
Identities = 445/451 (98%)
Strand = Plus / Plus
Query: 1 tttagtgacagttttgagagatattgataagggagaatttagtcatagattcagagggtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttagtgacagttttgagagatattgataagggagaatttagtcatagattcagagggtc 260
Query: 61 tagtagaaagacaaaatctatctcaccaccatcagtcattttatggtgtctagtttgaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagtagaaagacaaaatctatctcaccaccatcagtcattttatggtgtctagtttgaac 320
Query: 121 ccatgttccctttgagtgaaatcacatgactttaattttctctcctcctctcctctcctc 180
|||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 321 ccatgttccctttgagtgaaatcacatgactttacttttctctcctcctcttctctcctc 380
Query: 181 ttctcctacttcttctgattgtccagatccagtgctgtggaagtgtgtttttaaaacaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttctcctacttcttctgattgtccagatccagtgctgtggaagtgtgtttttaaaacaaa 440
Query: 241 gaaagggcatatgctttcacactactattagagaattacccccacaatctccaacacctg 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaaagggcgtatgctttcacactactattagagaattacccccacaatctccaacacctg 500
Query: 301 gacccagcaggccttgctgctgtgctcagtcctacggtgtgcaccgatttgtgtgctcag 360
||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 501 gacccagcaggccttgctgctgtgctcagtcctacggtgtgtattgatttgtgtgctcag 560
Query: 361 gacaaggttctctctttaatgagaagaaataaaatgacactgggcatcgacttcattggc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gacaaggttctctctttaatgagaagaaataaaatgacactgggcatcgacttcattggc 620
Query: 421 tctacaaacattatgggtaattattttaaac 451
|||||||||||||||||||||||||||||||
Sbjct: 621 tctacaaacattatgggtaattattttaaac 651
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 851
Length adjustment: 10
Effective length of query: 441
Effective length of database: 841
Effective search space: 370881
Effective search space used: 370881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
