Query= MSMg01no147_a10.b1 MSMg01no147_a10.b1 CHROMAT_FILE:
MSMg01no147_a10.b1 PHD_FILE: MSMg01no147_a10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:09:30 2005
(614 letters)
>mm_chr3_152262880_152263893
Length = 1014
Score = 1164 bits (602), Expect = 0.0
Identities = 608/610 (99%)
Strand = Plus / Plus
Query: 5 gaattcttcaggtatttttacattgtagtaaatcatatgtctgaattaaggaggaaagag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttcaggtatttttacattgtagtaaatcatatgtctgaattaaggaggaaagag 264
Query: 65 aatccatgagaaattagactgattaatatccaatttaaaaaatgtctcccattccttcct 124
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 265 aatccatgagaaattagactgattaatatccaattttaaaaatgtctcccattccttcct 324
Query: 125 tggctatttagttgtattttttttcttcctcttcacttatccccactttgtgtgtgtcca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tggctatttagttgtattttttttcttcctcttcacttatccccactttgtgtgtgtcca 384
Query: 185 tatgtgtgtgcacacacatactcacatgctcacatgtaaccttctcctctgaggaggggg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tatgtgtgtgcacacacatactcacatgctcacatgtaaccttctcctctgaggaggggg 444
Query: 245 aggcccccctgagtatctacccaccttgtcacatcaagtcactccaggactaggtgaatc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aggcccccctgagtatctacccaccttgtcacatcaagtcactccaggactaggtgaatc 504
Query: 305 ctctcccactgaggtcagataagcagtccagctaggggaatgggatccaccggcaggcaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctctcccactgaggtcagataagcagtccagctaggggaatgggatccaccggcaggcaa 564
Query: 365 tgaactcatggataagcctctactctagttgttgggggaccctcatgaagatggagctgc 424
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgaattcatggataagcctctactctagttgttgggggaccctcatgaagatggagctgc 624
Query: 425 acatctccatgtgtgcaggaagcctaggtccagcccatgcttgctttctggttggggttc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 acatctccatgtgtgcaggaagcctaggtccagcccatgcttgctttctggttggggttc 684
Query: 485 cagttactgggaacctcccagggtccaggttagctgactctgttggtcttctgtggagtt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cagttactgggaacctcccagggtccaggttagctgactctgttggtcttctgtggagtt 744
Query: 545 cccatccccttcaggtcccttaatccttcccccaactacacaatactccccaagctctgt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 cccatccccttcaggtcccttaatccttcccccaactacacaatactccccaagctctgt 804
Query: 605 ctaaggtttg 614
||||||||||
Sbjct: 805 ctaaggtttg 814
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1014
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1004
Effective search space: 606416
Effective search space used: 606416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no147_a10.g1 MSMg01no147_a10.g1 CHROMAT_FILE:
MSMg01no147_a10.g1 PHD_FILE: MSMg01no147_a10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:09:30 2005
(633 letters)
>mm_chr3_152361607_152362640
Length = 1034
Score = 1094 bits (566), Expect = 0.0
Identities = 617/634 (97%), Gaps = 1/634 (0%)
Strand = Plus / Minus
Query: 1 tcacatcaaagggagcacactccgaaaacaggctaccgctgttcaaggcaggcatctggc 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 834 tcacatcaaagggagcacactcagaaaacaggctaccgctgttcaaggcaggcatctggc 775
Query: 61 atgggattgaacatgagccattttcaaggtgattaagctcaaggcacagac-agagcaag 119
|||||||||||||||||| |||||||||||||||||||||| ||| ||||| ||||||||
Sbjct: 774 atgggattgaacatgagctattttcaaggtgattaagctcagggcgcagacaagagcaag 715
Query: 120 aagtcaaaacagtgaaggtcactgagcacagggacaaggaaatggagggctaccttccac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 aagtcaaaacagtgaaggtcactgagcacagggacaaggaaatggagggctaccttccac 655
Query: 180 agagatgaagagaaaagtggggcgagttttacaatgtggataaaatatggagtcttggtg 239
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 654 agagaggaagagaaaagtggggcgagttttacaatgtggataaaatatggagtcttagtg 595
Query: 240 ggtgtcttacactgaagcgacactcagtccaagcagaaatgtctccagcattgatgtacg 299
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 594 ggtgtcttacactgaagcgacactcagtccaagcagaaatgtctccggcattgatgtacg 535
Query: 300 tcggcaaaagggagaattagggctgtcgtagtctacagatacagcagataaaggtaggat 359
|||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||
Sbjct: 534 acggcaaaagggagaattagggctgtcatagtctacagctacagcagacaaaggtaggat 475
Query: 360 gacttggaattttagaggagcagaggccatcaagaaaagtggtgtggaaggagaggaaag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 gacttggaattttagaggagcagaggccatcaagaaaagtggtgtggaaggagaggaaag 415
Query: 420 agaagagttgagccagcggtggaagaagtcagaagacagtcacaacaggctttatcatct 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 agaagagttgagccagcggtggaagaagtcagaagacagtcacaacaggctttatcatct 355
Query: 480 ctttattcccagaggaataaagagagcttggagcggaggctgtggagaaaggctcagggt 539
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 354 ctttattcccagaggaataaagagagctcagagcggaggctgtggagaaaggctcagggt 295
Query: 540 tccttccagtcctctcttctgactcctccttggcccattccttcacatttcctctgcttg 599
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 294 tccttccattcctctcttctgactcctccttggcccattccttcacacttcctctgcttg 235
Query: 600 gtcaaggcgtctcttgactccaggggtcacagac 633
|||||||||||||||||||||||||||| |||||
Sbjct: 234 gtcaaggcgtctcttgactccaggggtcgcagac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1034
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1024
Effective search space: 637952
Effective search space used: 637952
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
