Query= MSMg01no147_m02.b1 MSMg01no147_m02.b1 CHROMAT_FILE:
MSMg01no147_m02.b1 PHD_FILE: MSMg01no147_m02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:25 2005
(625 letters)
>mm_chr3_47468142_47469167
Length = 1026
Score = 1197 bits (619), Expect = 0.0
Identities = 622/623 (99%), Gaps = 1/623 (0%)
Strand = Plus / Minus
Query: 4 ggaattctaagtgactgttggaagtgg-aacaatttacctaagaattttgaattttaaca 62
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 826 ggaattctaagtgactgttggaagtggaaacaatttacctaagaattttgaattttaaca 767
Query: 63 cacattatttgacttccttttcacaccgcttaacaaaaacaatgcatagcagattaatga 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 cacattatttgacttccttttcacaccgcttaacaaaaacaatgcatagcagattaatga 707
Query: 123 cagagtcacaataaacagcacaatgatcataagtcagtagttaaggaagattttcagtat 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 cagagtcacaataaacagcacaatgatcataagtcagtagttaaggaagattttcagtat 647
Query: 183 tatgcaccagaagtagtaaaaggtttaaaatgtgaagtataagtcaaagtgcctagcaaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 tatgcaccagaagtagtaaaaggtttaaaatgtgaagtataagtcaaagtgcctagcaaa 587
Query: 243 accatttgaaagggtcaagtgaacatacatttagtagctcacctatactgatatcagaag 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 accatttgaaagggtcaagtgaacatacatttagtagctcacctatactgatatcagaag 527
Query: 303 gctgacctaatttttaccctaacacccaatgtaagagagataattagagctttaagaagc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 gctgacctaatttttaccctaacacccaatgtaagagagataattagagctttaagaagc 467
Query: 363 tctgatacctatcctagtgatcatgacagaagttcttccggattatttcagataaaactg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 tctgatacctatcctagtgatcatgacagaagttcttccggattatttcagataaaactg 407
Query: 423 catgtctctgtggcccatgaaccatcactgagaagcacaagttggtgtccttggtaaata 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 catgtctctgtggcccatgaaccatcactgagaagcacaagttggtgtccttggtaaata 347
Query: 483 attactcccccaacccaatgtcctatgctcttccctgactaccagcagtcttctactagt 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 attactcccccaacccaatgtcctatgctcttccctgactaccagcagtcttctactagt 287
Query: 543 ggagaaatcagattccaccattgtcacatgactactttatgaattaaatgagcatataat 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ggagaaatcagattccaccattgtcacatgactactttatgaattaaatgagcatataat 227
Query: 603 ataattttaatcttaaagtttct 625
|||||||||||||||||||||||
Sbjct: 226 ataattttaatcttaaagtttct 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1026
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1016
Effective search space: 624840
Effective search space used: 624840
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no147_m02.g1 MSMg01no147_m02.g1 CHROMAT_FILE:
MSMg01no147_m02.g1 PHD_FILE: MSMg01no147_m02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:26 2005
(631 letters)
>mm_chr3_47321158_47322188
Length = 1031
Score = 1220 bits (631), Expect = 0.0
Identities = 631/631 (100%)
Strand = Plus / Plus
Query: 1 cagggaatcagtagtcccaaaccctgtttccttagagcacacactaatcacaaaacaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagggaatcagtagtcccaaaccctgtttccttagagcacacactaatcacaaaacaaaa 260
Query: 61 gtacatttccatatagatttatacagcctgtttttcactggtagctgggcagagctcttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtacatttccatatagatttatacagcctgtttttcactggtagctgggcagagctcttg 320
Query: 121 aagtttcttggtacagcaaacagcagtctttagtaactagtattacagtaagaacagaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagtttcttggtacagcaaacagcagtctttagtaactagtattacagtaagaacagaaa 380
Query: 181 aatgacagactactaaaattaaaattattgattacaaagttttgactattatgtaagtaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatgacagactactaaaattaaaattattgattacaaagttttgactattatgtaagtaa 440
Query: 241 agctattatctttctctaatatctttccaggcaatatcatttccaattcttcgtatagct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agctattatctttctctaatatctttccaggcaatatcatttccaattcttcgtatagct 500
Query: 301 aggagaacaaagtactaatgtttcatatgcttcagcatcatctatcatttcccaatcctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aggagaacaaagtactaatgtttcatatgcttcagcatcatctatcatttcccaatcctt 560
Query: 361 gtttcctcattctaacagttccttagactagtgtactctcttcctaattctatttattcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtttcctcattctaacagttccttagactagtgtactctcttcctaattctatttattcc 620
Query: 421 taaatcatatctagaatcctattgttccacccatacctattcttcctgggaccactttaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 taaatcatatctagaatcctattgttccacccatacctattcttcctgggaccactttaa 680
Query: 481 ctctccgtctttgatgtccccaagttcaccctggctaattaacacaccattcattcaact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctctccgtctttgatgtccccaagttcaccctggctaattaacacaccattcattcaact 740
Query: 541 tgaggatacatgtgtctcttcatgattccaaattcaaggccaactctggaaagacactat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgaggatacatgtgtctcttcatgattccaaattcaaggccaactctggaaagacactat 800
Query: 601 ttctacaaagggttatataggcttttatggc 631
|||||||||||||||||||||||||||||||
Sbjct: 801 ttctacaaagggttatataggcttttatggc 831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1031
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1021
Effective search space: 634041
Effective search space used: 634041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
